Vibrio cholerae O1 M66-2: VCM66_0541
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Entry
VCM66_0541 CDS
T00891
Symbol
hapR
Name
(GenBank) hemagglutinin/protease regulatory protein
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02020
Two-component system
vcm02024
Quorum sensing
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VCM66_0541 (hapR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCM66_0541 (hapR)
05111 Biofilm formation - Vibrio cholerae
VCM66_0541 (hapR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcm03000
]
VCM66_0541 (hapR)
Transcription factors [BR:
vcm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VCM66_0541 (hapR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
ACP04866
UniProt:
C3LS73
LinkDB
All DBs
Position
I:complement(569877..570623)
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AA seq
248 aa
AA seq
DB search
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPT
REDLVDDVLNFVVRQYSNFLTDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSA
STRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDVDNMASLFHGIFYSIFLQVNR
LGEQEAVYKLADSYLNMRVSIRTSFLGSTKGASAPFFVFRWVSLPAVINIPKRLGVAGRR
QMSESPRA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcaatcgaaaaacgccctcgaactcggctatcgcctcaaaaacgcaaacta
caactgatggaaatcgcgttggaagtgtttgctaaacgcggcattggtcgtggtggtcac
gcagatattgccgagattgcgcaagtctccgttgcaacagtgttcaactacttcccaact
cgtgaagacttggttgacgatgtgctgaattttgtggttcgtcagtactccaacttcttg
accgatcacatcgatcttgatttggatgtgaaaaccaacctacaaactctgtgcaaagag
atggtgaaattggcgatgaccgattgtcactggctcaaagtctggtttgagtggagtgct
tcaacccgtgacgaagtttggccactgtttgtttccaccaaccgaactaaccaactgctg
atcagaaacatgtttatgaaagcgatggagcgtggcgaattgtgtgagaaacacgatgtc
gataacatggccagcctgttccacggcatcttctactccatcttcttacaagtgaaccgt
ttaggtgaacaagaagcagtgtataagttggccgatagctacctcaatatgcgtgtatct
ataagaactagtttcttgggcagcacaaagggcgcatccgcgcccttttttgttttcaga
tgggtatcacttccagcggtaataaatatacctaaacgacttggtgttgcaggccggcgg
caaatgagtgaatccccacgagcatag
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