Vibrio cholerae O1 M66-2: VCM66_0877
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Entry
VCM66_0877 CDS
T00891
Name
(GenBank) putative exopolysaccharide biosynthesis protein
KO
K20921
polysaccharide biosynthesis protein VpsD
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00543
Exopolysaccharide biosynthesis
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
VCM66_0877
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCM66_0877
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcm01003
]
VCM66_0877
Glycosyltransferases [BR:
vcm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VCM66_0877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
ACP05195
UniProt:
C3LTG9
LinkDB
All DBs
Position
I:939799..940947
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AA seq
382 aa
AA seq
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MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEI
IQLSKHLEVVICPLREKRFGLPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKT
RNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYTCVGEELRQALSLETNKSIQ
VIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAP
LEMMAAGLPLISTPVGILGERQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYL
RDQFAVENVIEHYQNLYREVLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatattgcttatcatgccactctctacgctcaattggggggagaaaaatctt
ggtggtgtggattcagtatgccaaatgttggtacgtcaactcgctcagcaagagcgtcca
taccattaccgagtgttagcgtttgatccgctcaacaatcactcttattcaggcgagatt
atccagttgtcaaaacatctggaagtggtgatttgtccgttgcgggaaaagcgatttggg
ctgcctttgcctagcttattatccaattggctccgcatccaagagcaactgaaagactat
cagccagatttggttcactctcatctcaacagttggatgatgggacttgggcagaaaact
cgtaatgtgttgaccttgcattcttatcgcaagattgggcgtaagccagtttcaaaactc
aatgattttgtttatgaacaaatcattccatgggtaagtcatttttccgtcgatttttat
acttgtgttggcgaagagttgcgtcaagcgttatctctggagacgaataagtcaattcaa
gtgattggcaatccagtcgatcctgactatttctctgccaactctgcgaaccagaatctg
ccccagaatgaagtcaatttagtcacttgtgcattgattactcgacgcaagcgtattgat
cgagccattgtattactgcgtgagctaaaacagcgagggcaagcggctactttacgtatt
atcggacccaatatggattctgcttattacgcgcaattgcagcaattgatcaaagagtat
gagcttgaacaagatgtcatttttcttggcaaacttaatcagcgtgaaattgtacaacag
taccaacaagcgaatattggaatatttacgtcacaacaagaaacgttcggcttagcgcca
ttggaaatgatggcggcgggcttgccattaattagtactcctgtcgggattttaggtgaa
cggcaagcaacgtttgaccagttaggggtggtttttatgcaagaagggcaggaagcgatg
attgctgagcgaatcagtcagataaaaataacggatactcaagcgattcaaacctatttg
cgcgatcaattcgcagtagaaaatgtgattgaacattaccagaatctatatcgagaggta
ctgagttga
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