Vibrio cholerae O1 M66-2: VCM66_0906
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Entry
VCM66_0906 CDS
T00891
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00550
Peptidoglycan biosynthesis
vcm01100
Metabolic pathways
vcm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VCM66_0906 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VCM66_0906 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcm01011
]
VCM66_0906 (mrdA)
Enzymes [BR:
vcm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VCM66_0906 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VCM66_0906 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
ACP05224
UniProt:
C3LTJ8
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All DBs
Position
I:complement(971636..973552)
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AA seq
638 aa
AA seq
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MLRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRI
KVVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAF
EKERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYV
SRINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTL
KYVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVH
GISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWR
IPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTG
IDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKV
IAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAF
QNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENG
GGGSSNGAPVVRQIFDHVILGKKEEEPKAESKEEVIQP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttacgccagcatacccctatccgcgaccatcaagccgaaacgcatctgtttcgtaat
cgtgccatcgtctcttttgtcgggatcttgatctgcatgggtctgctggtgaccaacttg
tacaatattcagatcaaccaatatcaagactacaaaacgcgatccaacgataaccgcatc
aaagtcgttccgattgcgcctaaccgcgggctgatttttgaccgtaacggtgtgcttctg
gcggaaaaccgtccggtattcaacttagaagtgatccctgaaaaagtgccaaatatggaa
gagaccattgcgcgcttacaacaactcattgagatcagcccagaaaagcttgccgccttt
gaaaaggaacgcaaacagactcgccgctttaattctgtaccgctgctgactcagcttacc
gacgatgaagtggcgaaattttccgttaatcaacataaattccccggcgtttcagtcacc
gcgaacctcaaacgctattacccctatggcgaagtactgacccacgtgattggttacgta
tcgcggattaacgataaagatctcgaacgcttggacaaagaaggtaaaaaagccaactac
caagccactcgagatatcggcaaactcgggattgaacgctactacgaagacttactgcac
ggtaccgcgggttatcaggaagtcgaagtcaacagccgtggccgtgtcattcgcaccctt
aaatacgtcccccccattccgggaaaagatatcgtgctcaatctcgatatcgaacttcag
ctctatgcctacaagctgctcgaaggtcgccgcggctcgattgtcgctctcgatcctaaa
gataatggcgtgctcgccatggcatcgagcccaagttacgatcccaatgcattcgtgcat
ggtatttcaggtaaagcctacagcgatttactcaatgacaaacgtcgtccattagtaaac
cgcaccacgcttggcatttatccgccggggtcaaccgtcaaaccgtttattgcggtgtcc
gcactgcaagatgggatcattacacccaataccacccgtaatgatccgggttactggcgc
attcccaataccgatactcggcctttccgcgactggctacgttggggccacggccgggta
gacatcattaaatctctcgaagaatcggtagataccttcttctatcaaatcgcctatgac
atggggatagataaactctccagttggatgatgcgctttggctttggggatctgacgggg
attgatatttacgaagagagtaaagctaatatgccaacacgcgagtggaaaatggcacgt
cacaaagtgccttggtatcaaggtgacaccattccggttgggattggacaaggctattgg
actgccacaccgatgcaaattgctaaagcgacgtcggttttagttaaccacggtaaagtg
attgccccgcatctgctgcgtgccaccatagataacggtgaacagttctcaacccaaaaa
gagaccgagtacaccacttacccaccgattgatggcgtgccgaaaaagtattgggacatg
gctatccatggcatgtatctggttaaccatggtgctaaaggaaccgcacgtcgcgccttc
cagaatatgccttacgaaagtgcgggaaaatcagggacagcgcaagtatttggtctggcg
gaaggccaaaaatataacgcaagtgagttagcagagcacttacatgaccatgctctgttt
acgggctttgcccccgtcaaagatcccaaagtcatcgtcaccttcgtattggaaaatggc
ggtggcggctccagtaatggtgcgccagtcgtgcgacaaattttcgatcacgtgattttg
ggcaaaaaagaagaagagccaaaagcagaatcaaaagaagaggtaatacagccatga
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