Vibrio cholerae O1 M66-2: VCM66_1066
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Entry
VCM66_1066 CDS
T00891
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VCM66_1066 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcm01007
]
VCM66_1066 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcm03016
]
VCM66_1066 (serS)
Enzymes [BR:
vcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
VCM66_1066 (serS)
Amino acid related enzymes [BR:
vcm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VCM66_1066 (serS)
Transfer RNA biogenesis [BR:
vcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VCM66_1066 (serS)
Prokaryotic type
VCM66_1066 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
TMF_TATA_bd
Spectrin
Phage_GP20
DUF1664
DUF3086
DUF7216
Motif
Other DBs
NCBI-ProteinID:
ACP05383
UniProt:
C3LU07
LinkDB
All DBs
Position
I:1136568..1137875
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AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ
LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS
ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ
FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI
PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI
PAVLQKYMGGLTHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgtactgagctggacgaaacagctgcaaaattggcacgt
cgcggttttaaactcgacgtggagactatccgtactcttgaagaacaacgtaagtccatt
caagtagaagttgagaatttacaatccacgcgtaactccatctccaagcaaatcggtcaa
ctgatggcgtctggcgacaaagcgggcgctgaagcggttaaacaacaaatcggcactttg
ggtgacgatctggatgcgaaaaaagtggaattggatgcggttatggcgcaattggatgcg
atcacccaaaccgtgcctaacattccagacgatgcagtgccaaacggtaaagacgacagc
gaaaacgtagaagtttctcgttggggaacaccaaaaacttatgattttgaagtaaaagat
cacgtggatttgggcgaaatgggcgacggtctggatttcgctagcgcaaccaagatcacg
ggtgcgcgttttgtggtgatgaaaggtcaatttgctcgtttgcaccgtgctatcgcacag
ttcatgttggatctgcacaccgatcaacacggttacactgagctgtatgtaccttaccta
gtgaacgcggaaacgctgttcggtacaggtcaattaccaaaattcggtcaagatctattc
cacactgagcctctgactgagaaagccagtgatgaagagccacgccgtctgtcactgatc
ccaaccgcagaagtgccagtgaccaacttagtgcgtgacaccattttggatgaagctgaa
ctgcctctgaaaatgaccgcacacacgccttgtttccgctctgaggcgggttcttatggt
cgtgatactcgcggtctgatccgtatgcatcagtttgataaagtggaactggtacaaatc
actcgccctgaagattccatggcggcattggaagagttgactggccatgcagaaaaagtt
ctgcaactgctggagctgccttaccgcaaagtgattctgtgtacgggcgacatgggcttt
ggctcgtgcaaaacttacgacttggaagtttgggttccagcgcagaagacgtaccgtgaa
atctcttcttgttcaaacatgtgggatttccaagcgcgtcgtatgcaagcgcgtttccgc
cgcaaaggtgagaagaaacctgagttggtgcacacgctgaacggctctggtctggcggtg
ggtcgtaccatggtcgcgattttggaaaactaccaagaagccgatggtcgcattgcgatc
cctgcggtactgcaaaagtacatgggcggtttaacccatatcggttaa
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