Vibrio cholerae O1 M66-2: VCM66_1084
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Entry
VCM66_1084 CDS
T00891
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VCM66_1084 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcm03016
]
VCM66_1084 (trmU)
Enzymes [BR:
vcm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
VCM66_1084 (trmU)
Transfer RNA biogenesis [BR:
vcm03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VCM66_1084 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
ACP05401
UniProt:
C3LU25
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All DBs
Position
I:complement(1152873..1153991)
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AA seq
372 aa
AA seq
DB search
MMSVEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAED
LADAQAVCDKLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF
ADEVLDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGE
LEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEH
QGLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQL
HWVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGE
ICLGGGIIEERI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtctgtagagcacagcgcaaacagccaaaagaaagtgattgtcggtatgtctgga
ggggttgattcctctgtttcagcctatcttctcaagcaacagggttaccaagtggaaggc
ctgtttatgaaaaactgggaagaagacgataacgaagagtattgtactgcggcagaagat
ttagcagatgctcaggcggtgtgtgacaaactcggcatcccacttcataccattaacttc
gcagcagaatactgggataacgtatttgaatacttcctcgcggaatataaggcgggacgt
actcctaacccagatattttgtgtaataaagagatcaaatttaaagccttcttagaattt
gctgatgaagtgctggatgcggactacattgctatggggcactatgtgcgtcgcaccttc
ccgcagaatggcgaaaaaccgcaaatgctgcgcggtttagacggtaataaagaccaaagc
tacttcctttatactctgagtcatgagcaagtggcgcgtaccctattcccagtaggtgaa
ctagaaaaacctgaagtacgccgcattgccgaagaacaaggcttaattaccgcgaagaag
aaagattcaaccggtatttgttttatcggtgaacgcaaatttaccgacttcttatctcgc
tatttgccagcccaaccgggtaaaattgaaaccccggaaggcaaagtgattggtgagcac
caaggcttgatgtaccacactctcggacagcgtaaaggtctgcacattggtggtatgaaa
gagagcagcgaacagccatggtatgtggcggataaagatctcaaacgcaacgtactcatc
gcggtacaaggcgcggatcatcccctactcaaatcgcatggtttggtggcggctcagtta
cattgggttgatcgcacccccatcacagaacctgtacgttgcagcgtgaagacgcgttat
cgtcaaagtgacatcgcttgtaccatcattcccctgagtgatgaccgcatcaaggtgatg
tttgacgagccacaagtggccgtgactccgggacaatccgccgtcttttatcaaggtgaa
atctgccttggtggcggcattattgaagagcgcatttaa
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