Vibrio cholerae O1 M66-2: VCM66_1245
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Entry
VCM66_1245 CDS
T00891
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03030
DNA replication
vcm03430
Mismatch repair
vcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCM66_1245
03430 Mismatch repair
VCM66_1245
03440 Homologous recombination
VCM66_1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcm03032
]
VCM66_1245
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_1245
Enzymes [BR:
vcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VCM66_1245
DNA replication proteins [BR:
vcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VCM66_1245
DNA repair and recombination proteins [BR:
vcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VCM66_1245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
ACP05561
UniProt:
C3LLY5
LinkDB
All DBs
Position
I:complement(1326073..1326783)
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AA seq
236 aa
AA seq
DB search
MSAMFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAE
QDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKE
LLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIA
RRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLPPHTAIQSLWL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccatgttcgattctgcgatttactggcccgctcgatttgctcacttagcccag
caggctcggcaaacccatttacagcgcttttatgctcaacctctggttgaaggctcaaca
ccgattcatcagtgctcactggttgccctcgattttgaaacaacgggactgaatgccgag
caagatgccattgtgagtatcggtttagtgccttttactactcaacggatttttcttagt
caagctcggtattggttagtaaaaccctctcaaccgcttgaagatgagtcgatagtgttc
catgggatcacgcactccgagttgcagcatgcgcaagctccagaacaggtgttgaaggaa
ttactcgaggcgctgcacggcaagattgtcgtcgtacactttaggcatattgaacgtgat
tttttgcgccagattagcctgaatatatggggcgaggcgatcgagtttcccgtgttggat
acattagaaattgaacgtcagttactggataagcaacgctcgctgtggcaacggattgca
cgtcgacctttaccctcaatacgccttgggcaatcacggatgcgttatcacttaccgccc
tactcacctcaccatgcgctgacggatgccattgcgaccgcagaactttttcaagcgcag
tgcgcgcaccatctcccaccccacaccgctattcagtctttgtggctttag
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