Vibrio cholerae O1 M66-2: VCM66_1331
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Entry
VCM66_1331 CDS
T00891
Name
(GenBank) GGDEF family protein
KO
K20959
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCM66_1331
Enzymes [BR:
vcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VCM66_1331
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
Chordopox_L2
Motif
Other DBs
NCBI-ProteinID:
ACP05647
UniProt:
C3LM71
LinkDB
All DBs
Position
I:1426841..1428454
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AA seq
537 aa
AA seq
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MIDNIIRKKWMLKHVRVIVPLLVLLFSLLLTVFVVYTAYSLQLRHNRTLLENLADRQTMA
LQQFVDGDIHFIGSAANFFRSSTSDDWVRFHTFAEETLKGSQSLIALQWLVKVEPPQAET
FTARMQQRFPEFTLYTVPKTGEIKYGFGTDDQAKYVLSDIYPLNYDNRKLLGFYSERERF
KRILADIVVNRRPNVSDKVRLLQDGIDKSIVKDGMLVYHPVFSSEDDRSLLGVMVGVVRL
STYFEKLVQISVMEQDLDMRVIDTGFDSEDSPVLYQSPMWRADDEPKIERKLVLPNRDWV
LEFELHQPINHSEEWVLLGLGLGGVIISLLLSYIMRMQLEEKQRLTDMIEERTAELRYLV
EHDSLTNIYNRRFFSQHLCKMLDEKQSFTLISFDIDRFKQINDSYGHLAGDYALTHVVDV
VKKELVESDIFARFGGDEFAILSSVTDETALYTYLERIRKVVEAEPVMLNAETPLTLTIS
IGASINCEYSEPEILQSVDDQLYLSKSKGRNRVSIAQQCSKVESNYAFNSGRMFDFM
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatagataacataataaggaagaagtggatgctcaaacatgtgcgcgtgattgtgccc
ttgctggtactgttgttttctctgcttctgactgtgtttgtggtttacaccgcatactca
ttacagctgcgccataatcgtactctgctggaaaaccttgcggataggcaaactatggca
ctgcaacagtttgtcgatggtgatatccattttatcggctctgccgccaactttttccgc
tcaagcacaagcgatgactgggtgcgttttcacactttcgcagaagagactcttaaaggt
tcacaaagcctgattgctttacaatggttagtgaaagttgagccgcctcaggctgaaact
tttaccgcgcgaatgcagcaacgttttcctgagttcactttgtacacggtgccaaaaacg
ggagagatcaaatacggtttcggtacggatgaccaagcgaaatacgttttatcggatatt
tatccactcaattatgacaatcgtaaactgttaggcttttactcggagcgtgaacgtttc
aaacgaatactggcggatattgtcgttaatcgtcggccgaatgtttcggataaagtgcgc
ctgctacaagatgggattgataagtcgatcgtcaaagatggcatgttggtctatcaccct
gttttttcttcagaagatgatcgcagcttacttggtgtgatggtcggggtggtgcgccta
tccacctatttcgagaaactggtccaaatcagcgtcatggaacaagatctcgatatgcgc
gtgattgacaccggatttgattcggaagacagtccggttctttatcaaagcccgatgtgg
cgagcggatgatgaacccaaaatagagcgcaaattggtgttgccaaaccgtgattgggtg
ctggagtttgaactgcatcagccgattaaccatagtgaagagtgggtgctactgggctta
gggttgggtggcgttattatttctctgctgcttagctacatcatgcgaatgcaactggaa
gagaaacaacggctgacagatatgattgaggagcgtaccgcagagctgcgttatctggtg
gagcatgacagtttgaccaacatctataaccgccgcttctttagtcagcatttgtgcaaa
atgttagatgaaaaacaatcctttaccttgatttcatttgatatcgaccgctttaagcaa
atcaacgacagctatgggcatttagcgggggattacgctttaacgcatgtggttgatgtg
gtcaaaaaagagttggttgaatcggatatttttgcccgtttcggcggtgatgagtttgcc
atcttgtcatccgttactgatgaaacggcgctttatacttatctagagcggatccgtaaa
gtggtcgaagcagaacctgtgatgctcaatgccgagacaccattaaccttaaccatcagt
attggggcgagcattaactgtgagtacagtgagccggaaattttacagagtgttgatgat
cagctctatctcagtaaatcgaaaggtcgaaatcgtgtatcgattgcgcagcaatgcagc
aaggtagaatcgaattatgccttcaattcaggtaggatgttcgactttatgtaa
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