Vibrio cholerae O1 M66-2: VCM66_1347
Help
Entry
VCM66_1347 CDS
T00891
Name
(GenBank) putative deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcm
Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_1347
Enzymes [BR:
vcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VCM66_1347
DNA repair and recombination proteins [BR:
vcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VCM66_1347
Prokaryotic type
VCM66_1347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACP05663
UniProt:
C3LM87
LinkDB
All DBs
Position
I:1440604..1442118
Genome browser
AA seq
504 aa
AA seq
DB search
MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ
AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ
HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP
ATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNIS
LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPV
PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL
ARHVRQAKPRTSPRQPNKRQPEMD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaatctggtatggctcaaacgcgacctaaggctgaccgatcacgcgcca
ttacaagcggcgttaacttcggggcgaccgacgttactactctatctgtttgagccaatg
ctgcttggcgatgcgcattacagcgaacgacactggcgctttgtgtggcaatcattgcaa
gccatcaatcgtgatttggcgcagagtaaaggggaggtgttgatcgtcacatccgattgg
caaacctgctttgcacgtattgctgagcgctacgccattgaggcgatttattctcatcaa
gaagtcggtttagcctgcacttttcagcgcgatcttgcgctggcgcagtggtgccagcaa
cacgacatcgtctggcatgagtttccttatgccgccgtgatccgcggcgcgcaaacccgt
aaaaattgggatgagcattggcagcaagtgatgcgctccccttgctgcgatcctgattta
acacgcgccaattggctgaagctggatgccgcaacacttggtttgcgcagcgatatccct
gccacatggcagagtaaacaagcgggcatgcaaactggcggcagtgatatggcgtgggcg
acgctggaggattttttcgcgcgtcgagggcgagagtattaccgctccatttcaagtccg
agcttagcgcgccacgcgtgctcgcggatgtcgccttatcttgcgtgggggaatatctca
ctgcgggagatgtatcaaactttgctcaaacactggtcggtagcgggatttcgccgcagc
ctgattgcgctttcatcacgtctgcattggcactgtcactttatccaaaaatttgaatca
gaatgtgagatggagtttcgctgcgtcaaccgcgcttatgattcactcttacagcaatca
agcgatgcccccgccgcgcagttagcggcttggcaaactgggcacaccggcattccactg
gtcgatgcctgtatgcgttgcttaattcaaaccggatacctcaattttcgcatgcgcgcg
atgttggtgagcgtgttaactcatcatatgaatgtggattggcgagcgggcgtgacttat
ttggcgcaactgttcctcgattttgaaccgggcattcattatccgcagtttcaaatgcaa
gcaggggtcacgggtaccaatactatccgcatttataacccgaccaagcaagcacaagag
catgacagcgaagggcagtttattcacaaatgggtgccagagttggcgcaagtgcctgta
ccgctgctctttgaaccctggctgatgacaccgcttgaagcgcagatgtatcaagtaccg
cttgagagcccttacctcaagccggtgatggatttggaagccagtgccaagcaagcacgg
gatcgcttatggcagtggcagaaactgcctgcggtacaagccgaagcgatgcgtatcctc
gcgcgccatgtgcggcaagctaaaccgagaacttcgccgcgccaacccaacaagcgtcaa
ccggagatggattaa
DBGET
integrated database retrieval system
