Vibrio cholerae O1 M66-2: VCM66_1560
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Entry
VCM66_1560 CDS
T00891
Name
(GenBank) RTX toxin
KO
K20276
large repetitive protein
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCM66_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
HemolysinCabind
Big_9
Cadherin_4
Calx-beta
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ACP05873
UniProt:
C3LMU7
LinkDB
All DBs
Position
I:complement(1680714..1688495)
Genome browser
AA seq
2593 aa
AA seq
DB search
MGIHALLSLTNLAANQLLVIDKNGNIAIINAGEAVPEGAIILDPNSNNLMPEQEPLPVAQ
LVDAEGNVQPITDDIEQILAALEEGADPTALDDLAPAAGGLQGSSITGSASIERDGAETI
ASTQFDTSGFEAIGLSRTQSLSLLNLLQAPTAPITPIPPVDPEEPASPIVISSITGDNAA
EGSNNTFSVSLSGTTAAETTIVLTLAGDTATKGVDFNGTSVIVVINGVSQTVPVNEDGTF
QVTVPTNTNSFSVQVSTIDDNIYEGNETFTLSGAGTNSIVTGTATITDDGSNGGTDDSPV
VNGISSPTVSEGESATFDVSLSNASTTATTVTLTLAGGSATAGTDFTSSEVTITYQDGTT
QTVAVNGDGSFEVAIPAGDTTFSISVQTTDDNVYEGSESFTLSGKTATQGTAITTTGTIV
DNDEVPTIKSIGTGDVTATEGDALIFTVKLSNVSSTSTSFDFLLQDGTATSDDYGAASFS
NGVTYDASTGKITVPTGVTSFTVNVPTTNDSIEEADETVKLTIGGKEVIGTIVDNDNAPV
IDDATVNNLSESIANGTEVYDVHEARTGNDTDLDGEALQYTFVHSNNTRSTTSEDGAFSI
DPGTGKITVLDTTKLDYESATSIVLKVETTDGVNKDTADITLNLTNVNDSDTVFTKESET
FNYAEGTAAGVTLGKVTATDADGDSISYSIAQEHNVYAADDVNKERPFYQVDANGNVSLT
EAGEKAFTNDYESGRNTHTITVTATGTDGSGADTTDTIEVTLNETNIDDNAPKFEGTTDG
EYSFSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEA
AANDFEALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSY
DENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFE
ALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAA
DTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVH
SLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTVLGT
VKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVTA
TEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTVLGTVKATDA
DKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVTATEDAGL
GGVKTTDITVKLNEQNIDEELSISGLNGANAELTIHESNLSGGSSPDHSALSKVGSFSFT
SIDGLASLVIAGHSFNVAELLALNSSEATISTPYGELTLTGFSGDLTGGTVQYEYTLNEN
VDNDSATNANDTDYTDHISVTVIDVDGSQITDSLDVKIVDDASTALDDRGEVDIVADSFT
VSGVVANWTSWSNGTNVTTFDGTNAPNGGGLDNDSGKDQIRWGQPASSYSSGYGFIDNDS
ALNGEFALNQDIILGTFTHYNYPVYSGGAITSASMDVAFSVTDAHGVLTPVTLKLNFDHN
ETPNTNNPEASKDIIKVGNTNVTFENAGALYTLQVIGFRIPGTNQIVTEIRTGENATNSY
ELVVRVGPGEGYELPSTSGNVLSNDVSGADVDMTVVGAASGNHVSSGVSGSVGSMIAGLY
GNLILLADGSYTYQVTANASSIPNDAIEIFTYTMKDGDGDTSTALLSINVNRVTMADFNA
NQDHKVGLEDTVVAGNVLDNDGSKNTSVDHFTVGNDATSHVVGSPVSLEQGELTLNSDGS
YTFKPADNWNGEVPVITYTTHTGKTSTLAITITPVDDATVTQPDHKSIAEDTIATGNVLA
NDCDIDSALSVTSFHVEGVNGVYTAGNTMYQLAEGTLVLKANGDYTFDPKDNWSGSLPEI
TYTTNTGATGTLNIHVEAVADVPNLTINGYTSVAAINFEDARLNGSWDGVVANQIKGLNT
IGTWHTSNNSGKVEIGYENIYVSGGSSTNKVMEIEFNNGDKTLYTDIHAQAGRFYELDFD
IAARAGSVNSSGLTIKLVPLNAYGVPILAEAITLYDFNPTNANWLRDQKVTLPIDQTGEY
RLLFESDDANSYGAILDNLAFKVVDNMGYRGDFIKLSEISTSLNDTDTSETLSLKLKGMP
EGSILKDDKGHEVTVGSNGEVDITGWDYSSLQIKTPNHGNFNITVEATATESSNQDSATT
SATIPVTVLHPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVTI
DTDLVIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHD
GVLLQSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADN
DYLSGGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFHLSE
KDKIDLSDLFDNPSEQEVTALLDSIKSTVQGDDHSSSFKVEKNDGSSVTIQLDGVSSVEL
INNLASIIQIKED
NT seq
7782 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcatgctttgttgtctttaacaaatctagcagcaaatcagctgctcgtgatt
gataaaaacggaaatatcgcgatcatcaacgcaggagaggcggttcctgaaggtgcgatt
atcctcgacccgaatagtaacaatttgatgcctgagcaggagccactgcccgtagcacaa
ctggtggatgctgagggtaacgtccagccgatcaccgacgatatagagcagattttagcc
gcattagaagaaggcgcagacccgactgcactagatgatctcgccccagcagcaggtggc
cttcaagggtcatccatcacgggtagcgcctccattgagcgtgatggtgctgaaaccatc
gcgtcaacacaatttgatacatccggcttcgaagccattggcctatcaagaacgcaaagc
ttgagtttgctgaacctactgcaagctcctacggctccaattacccctattccaccagtt
gatccagaagagcctgcctctcccattgtaattagcagtattacaggcgataacgcagcc
gaaggtagcaacaataccttttccgtgagcctatcaggtactactgccgcggaaactaca
attgtgctgacactggctggtgacactgcgaccaaaggtgtcgatttcaatggtacgtca
gttattgtcgttattaatggtgtgagccagacagtgccagttaatgaagatggcaccttc
caagtaacagtgccgaccaatacaaacagctttagcgttcaagtctctaccattgatgac
aatatctacgaaggaaatgagaccttcaccctaagtggtgcgggcacaaatagcatagtc
acaggtacagcgaccatcactgatgatggcagcaacggcggcacagacgacagcccagta
gtaaatggcatcagcagcccaaccgtatcagaaggggaaagcgcaacgtttgacgttagc
ctgagcaacgccagcacaacagcgaccaccgtcactttgacattggcgggtggcagcgcg
actgcaggcacagacttcaccagtagcgaagtgaccatcacttatcaagatggcaccaca
caaaccgtggccgtcaatggcgatggttctttcgaagtggcgatcccagcgggtgacacc
acgttcagtatctcggttcaaaccaccgacgataacgtatatgaagggagcgaaagcttc
acactgagcggaaagaccgcgactcaagggacggcgattaccacgaccggaaccatcgtc
gacaacgacgaggtaccgaccatcaagtcgatcggcaccggcgatgtgaccgcgaccgaa
ggcgacgcgctgatcttcacggtgaaactgagcaatgtcagcagcaccagcacgtccttc
gacttcctgctgcaagatggcaccgccacgtccgacgactacggtgcggccagcttcagc
aacggtgtgacctacgacgccagcaccggcaagatcaccgtgccgactggcgtgaccagc
ttcaccgtcaacgtacctactaccaacgacagcatcgaggaagccgacgaaaccgtcaag
ctgaccatcggtggcaaagaggtgatcggcaccatcgtcgataacgacaacgcgccggtc
atcgacgacgcgaccgtgaataacttgtcagagagcatcgcgaacggcaccgaagtgtac
gacgtacatgaagcgcgcaccggcaacgacaccgacctcgatggtgaagcactgcaatac
accttcgtgcacagcaacaacacccgtagcactactagtgaagacggtgcgttcagcatc
gatccaggcaccggtaagatcaccgtgctggataccacgaagttggattacgagagtgcc
acgtcaatcgtcctgaaagtcgaaacgactgacggcgtgaacaaagacactgcagacatc
acactcaacctgactaacgtcaacgacagtgacacggtcttcaccaaagagagtgagacg
ttcaactatgcggaaggcacggcggcgggtgtaacgctgggcaaagtcacagcgaccgac
gccgatggcgacagcatcagttacagcatcgcgcaagagcacaacgtgtacgcggcggat
gatgtgaataaagagcgtccgttctaccaggtggatgcgaacggcaatgtgagtctgacc
gaggcgggtgagaaagcgttcaccaacgactacgagtctggccgaaacacgcacaccatc
acggtgacggcgacgggcacagacggttcgggcgcggacaccacagacaccatcgaggtg
acgctgaacgaaaccaacatcgatgacaacgcaccgaagtttgaaggcaccaccgacggt
gagtacagcttcagctacgacgaaaacagcgcggcggacaccgtactgggcacggtcaag
gccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaacgacaacggc
tggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcg
gcggcgaacgactttgaggcgctggccaacgtgcacagcttggtggtgactgcgaccgaa
gacgcaggtctggggggcgtgaagaccaccgacatcacagtcaagctcaacgagcagaac
ctcgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttcagctac
gacgaaaacagcgcggcggacaccgtactgggcacggtcaaggccaccgatgcggataaa
gagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcgattgatgcg
accacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaacgactttgag
gcgctggccaacgtgcacagcttggtggtgactgcgaccgaagacgcaggtctggggggc
gtgaagaccaccgacatcacagtcaagctcaacgagcagaacctcgatgacaacgcaccg
aagtttgaaggcaccaccgacggtgagtacagcttcagctacgacgaaaacagcgcggcg
gacaccgtactgggcacggtcaaggccaccgatgcggataaagagacggtgacctacagc
atcaagtcaggcaacgacaacggctggtttgcgattgatgcgaccacgggcgtgatcacc
ctgactgcgaaaggtgcagaggcggcggcgaacgactttgaggcgctggccaacgtgcac
agcttggtggtgactgcgaccgaagacgcaggtctgggtggcgtgaagaccaccgacatc
acagtcaagctcaacgagcagaacctcgatgacaacgcaccgaagtttgaaggcaccacc
gacggtgagtacagcttcagctacgacgaaaacagcgcggcggacaccgtactgggcacg
gtcaaggccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaacgac
aacggctggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggtgca
gaggcggcggcgaacgactttgaggcgctggccaacgtgcacagcttggtggtgactgcg
accgaagacgcaggtctgggtggcgtgaagaccaccgacatcacagtcaagctcaacgag
cagaacctcgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttc
agctacgacgaaaacagcgcggcggacaccgtactgggcacggtcaaggccaccgatgcg
gataaagagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcgatt
gatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaacgac
tttgaggcgctggccaacgtgcacagcttggtggtgactgcgaccgaagacgcaggtctg
gggggcgtgaagaccaccgacatcacagtcaagctcaacgagcagaacattgatgaagag
cttagtatttcagggttgaatggagctaatgctgagttaactatccatgaatctaatctt
tcaggtggttcgtcgccagatcactctgctcttagcaaagttgggagtttcagttttact
tctattgacggcttagcgtctttagtaatcgcgggtcatagttttaatgtggcagaactt
cttgcgttgaattcatctgaagcaacaatttcaacgccttatggtgaactcaccttgacg
gggttcagtggtgatctcactggtggaacagttcaatacgaatatacgttgaacgaaaat
gtggataacgattcagccaccaatgcaaatgacacggactataccgatcatatctctgtg
actgtgattgatgtggatggcagccagatcacagatagcttagacgttaaaattgttgat
gatgcttctacggctcttgatgaccgtggtgaagtggacattgttgctgacagtttcacg
gtctctggtgtggttgctaactggacatcatggagtaatggtaccaacgtaaccacgttt
gatggaactaatgcaccaaatggtggtggcttagataatgacagtggcaaagaccaaatc
cgttggggtcaacccgctagctcatacagctctggctacggatttatcgataatgatagt
gcgctaaacggtgagtttgccttaaaccaagatattattttgggtacttttactcattac
aattatcccgtttattcaggtggtgcgattaccagtgccagtatggatgttgcgttctca
gtgacagatgcccacggcgtacttacacctgtaacgttgaaactgaattttgatcacaat
gaaacgccaaataccaataatccagaagcctcaaaagacatcattaaagttggtaatacc
aatgtgacttttgagaatgcaggggctctctataccttgcaagtgattggctttaggatt
cctggcaccaatcaaattgtgacggaaattagaacgggtgaaaacgcaactaacagctat
gaattggttgtacgtgttggacctggtgaggggtatgaattgccatccacatcaggcaac
gtattatccaatgatgtttctggggcagatgtcgatatgacggttgtcggagcagcctct
ggtaatcacgtgagttccggtgtctcaggcagcgttggatctatgattgcgggcctgtat
ggcaatttgatcctgctcgctgatggtagctacacataccaagtgacagcgaatgcatct
tcgattcctaatgatgcaatcgagattttcacttacaccatgaaagatggtgatggtgat
acctcaactgcgttactttctatcaatgtgaaccgagttacgatggcggatttcaatgct
aaccaagatcacaaggttggtttggaagacaccgtggtggccggtaatgtgttagacaat
gatggaagcaaaaatacctcagtggatcatttcacggtaggtaatgatgccacttctcac
gtggtgggtagccctgttagcttagagcaaggtgagctgacgcttaattcggatggcagt
tacacatttaagccagcagataactggaatggtgaagttccggttattacctacacaacc
cacactggaaaaacgagcacactcgccatcaccatcacccctgttgatgatgcgacggtt
actcaacctgatcataagtcgattgcagaagatactattgcgacgggtaatgtgctggcc
aacgattgcgatatagacagcgctctctcagtcaccagcttccatgttgagggagtcaat
ggtgtttataccgctggtaatacgatgtatcagctggctgaaggtactttagtgcttaag
gcaaatggtgattatacctttgatccaaaagataactggagtggctcactaccagaaatt
acctataccaccaataccggagcaactggaactctgaacattcatgttgaggcggtggct
gatgtgccgaacctgactatcaatggctatacctctgttgctgcaatcaatttcgaggat
gcgagattgaatggcagttgggatggcgtggttgctaatcagattaaaggtctgaacacg
attggaacgtggcataccagcaataatagcggtaaagttgaaatcggttacgaaaatatc
tatgtctccggtggttcttcaacaaataaagtcatggaaattgagttcaataacggtgac
aagacgctgtataccgatattcatgctcaagcgggtcgtttttatgagctagattttgat
attgcagctcgtgctggttctgtgaacagttcaggtttaaccattaagcttgttcctctg
aatgcttacggtgttcctatccttgccgaggcgatcactctttatgatttcaatccaacc
aatgcgaactggttgagagatcaaaaagttacgctccctattgatcaaactggggaatat
cgtctgttgtttgaaagcgatgatgctaatagctatggggcgattttagataatttggcg
tttaaagttgttgataatatgggctaccgcggagatttcattaaactgagtgaaatttcc
acttcactgaatgataccgatacctctgaaaccttgagtcttaaattaaaaggaatgcca
gaagggtcgatcttgaaagacgataaaggtcatgaagttacagtgggttcaaacggtgag
gtagatattacaggatgggattacagcagcttacaaattaaaacgccgaaccatggtaat
ttcaatattactgttgaagctacggcgactgaaagcagtaaccaagatagtgcaacgacg
agtgcgacaattccggtcacggtattacatcctaatgagtatttgggacgtggcggtgtt
gactctttcttgttgaccaaaagcaatggcgataatgctaacttaaatattgctctcaat
gcttattatgaaggcaccacagcggtcgcacctgtgacgcaacaagtagcagtaacgatt
gatacggacttggtgattcattcaggaaatagtaacgattatatcgatttaggtattagt
cgcgcggataatacggtttataccggtagctcaattcctaactttaataattccacgccg
tcacaatctacactggcggatagcgcgtttatgaaaaatgacgtgattactgatcatgat
ggtgtgttattacaatcggtacaaagccaaattcagccgatcactgatacggtgaattta
ggtagtggtaacgatacagtttatggcggaggtggaaaccttgccgcttatggcggagcg
ggtaatgacactctgattggcggtgatggcaacgatgcactcagaggtggtgcggataat
gactatctttcaggaggtcgtggtaatgacgttttacgtggtgattcaggcaatgacgtt
cttattggtggtcttggccatgatattttaaccggtggctcaggagaagatctcttcaaa
tgggttgatggagatctggatggaagtacagatcgaattactgatttccatttatctgag
aaggataagattgatttaagtgatttgttcgataatccatcagagcaagaggtgacggca
ctattggatagcattaaatcaacggtgcagggtgatgatcattcatcgtcattcaaagta
gagaaaaatgatggttcttcggtgacaattcaattagatggcgtgtcgtccgttgaactt
attaacaacctagcatctataattcagattaaagaagactag
DBGET
integrated database retrieval system
