KEGG   Vibrio cholerae O1 M66-2: VCM66_1703
Entry
VCM66_1703        CDS       T00891                                 
Name
(GenBank) putative type I restriction enzyme HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vcm  Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vcm02048]
    VCM66_1703
Enzymes [BR:vcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VCM66_1703
Prokaryotic defense system [BR:vcm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VCM66_1703
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD USP8_dimer N_NLPC_P60
Other DBs
NCBI-ProteinID: ACP06010
UniProt: C3LN84
LinkDB
Position
I:complement(1852923..1855991)
AA seq 1022 aa
MVFMVSKTNEQALEAAIEKGLAGICKEELALGEAPLNYNNDLYLIGSPSDFDKQYALDTR
LFWQFLEDTQASELEKLKRTSPHDWQRKILERFDRMIKRHGVLRLLKKGLDVDDAFLSLM
YPAPLASSSEKVKKDFSANLFSVTRQVCYSNANPLEEIDMVLFINGIPLITLELKNPWTG
QNAVYHGQKQYRDDRDANQPLLNFARCLVHMAVDTDEVYMTTKLAGKNTFFLPFNKGFNF
GKGNPINPHGHKTAYLWQEVFRKESIANIIQHFIRLDGSSKKQLDKRTLFFPRYHQMDVV
RRLVDHCSVNGVGQTYLIQHSAGSGKSNSITWAAYQLIETYPISDDLPGSRGKEMPLFDS
VIVVTDRRLLDKQLRDNIKEFSEVKNIVAPAFKSSELKSALENGKKIIITTIQKFPYIVD
GIADLSDRRFAVIIDEAHSSQDGHNQDKLNEAMGFVSEDVLDKALQSAKNRKMRSNASYF
AFTATPKNTTLEKFGQRQADGTYVPFHLYSMKQAIEEGFILDVIANYTTYKSYYEIEKSI
QDNPEFDSKKAQKRLRAYVEASQETIDTKAEIMLEHFIKHVVNGKKLKGKGKGMVVTQNI
ESAIRYYRALTRQLNKMGNPFKVAIAFSGSKEVDGIEYTEADINGFPEGDTKDYFDVNYK
RKEPDSPIPKHVDQDAYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQALSRLNRSA
PKYGKKTEDLFVLDFFNSVDDIKTAFDPFYTSTTLSEATDVNVLHELKDDMDDTDVYEWF
EVEEFNKRFFEGREAQDLSPIIDIAAARFNHELELENEFKVDFKVKAKQFVKIYGQIASI
MPYEVVQWEKLFWFLKFLIPKLSVEDPDKEALDSLLDSVDLSSYGLQRVKLNHSIELDDS
ETELDPQNPNPRGAYGPEAEKDPLDEIIKIFNERWFQGWSATPEEQRVKFVNIAESIRNH
PDFEAKYQNNADPHTRELAFEKMLKEIMLQRRKDELELYKLFAQDPAFKASWTQSMQRMV
GM
NT seq 3069 nt   +upstreamnt  +downstreamnt
gtggtatttatggttagtaaaacaaatgaacaggcgctagaggccgcaatcgaaaaaggt
ttagcaggtatttgtaaagaagagttagcgctgggtgaagcgcctcttaattacaataat
gatctttatcttattggctctccaagtgactttgacaagcagtacgctttagatacccgt
ttgttttggcaattcctcgaagatactcaagcgagtgagttagaaaaacttaagcgcacc
agccctcacgattggcagagaaaaatccttgagcgtttcgatcgtatgatcaagcgccat
ggtgttttgcgactattgaaaaaagggctagacgttgacgatgcctttctatcgttgatg
tacccggcaccactcgccagtagttctgagaaggtaaaaaaagatttttctgccaacctg
tttagtgtgactcgccaggtttgttattccaatgcaaatccattggaagaaattgacatg
gtgctttttatcaatggtatccctctgattacccttgagcttaaaaacccatggacgggc
cagaacgctgtttatcatggtcaaaagcagtaccgcgatgatagagatgcaaatcagcca
ttgttgaactttgctcgttgcttggttcacatggcggtcgataccgatgaagtctatatg
acgactaagctggcaggcaaaaataccttcttcctgccgttcaacaaaggcttcaacttt
ggcaaaggtaacccgattaatccacatgggcacaagacggcctacttgtggcaagaggta
ttccgcaaagaaagcatcgccaatattattcagcactttattcgtcttgatggcagcagt
aaaaagcagttggacaaacgaactttgttcttccctcgatatcaccaaatggatgtcgta
cgtcgcttggttgatcactgctcagttaatggtgttgggcaaacgtatttgatacagcac
tcagcggggtcaggtaaatctaactcaattacatgggcggcgtatcagctcatcgaaact
taccctattagcgatgatctaccaggaagtagaggaaaagaaatgcctctattcgattcg
gtcatcgttgttactgaccgccgattgctcgataagcagttacgcgacaatataaaagag
ttctctgaagtgaagaacattgttgcgcctgcgtttaaatcgtcagaactaaagtcagca
ttagagaatggtaagaaaatcatcattaccaccattcaaaagtttccctatattgtcgat
ggtattgcagacttaagtgataggcgctttgctgtcatcattgatgaagcacacagttcg
caggatgggcataaccaagataagttaaatgaagcaatggggtttgtttcggaggatgtt
ttagacaaagcattacaaagtgcgaaaaatcgtaagatgcgctcaaatgcatcttacttt
gcattcaccgcaacgcccaaaaacaccactctagaaaagtttggtcagcgacaagcagac
ggaacttatgttccttttcatttgtactcgatgaaacaagccatcgaagaagggtttatc
ctcgatgttattgccaattacacgacctataagagctactacgagattgaaaaatcaatc
caagataaccctgagtttgacagcaaaaaagcacagaagcgcttacgagcgtatgtagag
gcaagccaagagacgatagacactaaagccgagatcatgcttgagcatttcatcaagcat
gtcgttaacggcaagaagctaaaaggtaaaggcaaaggtatggtggtgactcaaaacatt
gagtcagccatacgttactatcgggcactaaccagacagctcaataaaatgggcaatccg
tttaaagttgccattgcattctctggctcaaaagaagtcgatgggattgagtacacagaa
gctgacattaatggtttcccagaaggtgataccaaagattactttgatgtgaactacaag
cgtaaggagccggactctccaatccctaagcacgtagaccaagatgcttaccggttgctg
gtagtggcgaataagtatttaacaggctttgatcagccgaaactttgtgccatgtacgtg
gataaaaagttggctagcgttttgtgtgtccaagctctgtcacgcttaaaccgttcagcg
ccaaagtacggtaagaaaacggaagatctgtttgtgttggatttcttcaactcagtggat
gatatcaaaaccgcattcgaccctttctatacatccacaacgctttctgaagcgacagat
gtcaatgttcttcatgagctaaaagatgatatggacgacacagatgtttatgagtggttt
gaagttgaggagttcaacaagcgtttctttgaaggacgagaggctcaggacctaagccca
atcattgacatcgcagctgcgcgttttaaccacgagttagaactagagaacgagtttaaa
gtcgatttcaaagtgaaagccaagcagtttgtgaaaatctacggccagattgcatctatc
atgccttatgaggtcgttcagtgggaaaaactgttctggttcttgaaatttttgattccg
aagctttccgtcgaagacccagataaagaagcactagactcattactagattcagttgat
ttgagctcttatggattacaaagggttaagcttaaccattccatcgagctagatgactct
gaaactgagttagatcctcaaaacccgaacccgcgcggggcttatggtcctgaagctgag
aaagatccgttagatgagatcatcaaaatctttaacgaacgctggttccaaggctggagc
gcaacaccagaagagcagagagttaagtttgtgaacattgctgagagcatccgaaatcac
ccagatttcgaagctaaataccaaaacaacgcagaccctcatacgcgagagttagcgttt
gaaaagatgttgaaagaaatcatgcttcaacgtcgtaaagacgagttagagctctacaag
ctgtttgcccaagacccagcttttaaagcgtcttggacgcagagcatgcagcgtatggtt
gggatgtaa

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