Vibrio cholerae O1 M66-2: VCM66_1909
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Entry
VCM66_1909 CDS
T00891
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00061
Fatty acid biosynthesis
vcm00071
Fatty acid degradation
vcm01100
Metabolic pathways
vcm01212
Fatty acid metabolism
vcm02024
Quorum sensing
vcm04146
Peroxisome
Module
vcm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VCM66_1909 (fadD)
00071 Fatty acid degradation
VCM66_1909 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VCM66_1909 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCM66_1909 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcm01004
]
VCM66_1909 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcm04147
]
VCM66_1909 (fadD)
Enzymes [BR:
vcm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VCM66_1909 (fadD)
Lipid biosynthesis proteins [BR:
vcm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VCM66_1909 (fadD)
Exosome [BR:
vcm04147
]
Exosomal proteins
Exosomal proteins of breast milk
VCM66_1909 (fadD)
Exosomal proteins of breast cancer cells
VCM66_1909 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
DUF4235
Motif
Other DBs
NCBI-ProteinID:
ACP06212
UniProt:
C3LNT6
LinkDB
All DBs
Position
I:complement(2074120..2075820)
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AA seq
566 aa
AA seq
DB search
MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA
DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF
TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT
ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ
RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT
NVGKILRRVLREENDAQLAAKAKQSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccgaaagacgtaccggaaaccattaatcctgat
cagtacccatcactggtcgaaatgtttgaacaatcggtacataagtacgcggatcagcca
gccttcatgaacatgggcgcggtgatgacattccgtaagctggaagagcgcagccgcgcc
tttgcggcttatttacaaaacgatctcaagctgaaaaaaggtgaccgtgtcgctctgatg
atgccgaacttgctgcaataccctgtggcgctgtttggtgttctgcgtgctggcatgatc
gcagtgaacgtcaacccactttacactccgcgagagctggagcatcaactgaatgatgcg
gatgcgcgcgcgattgtgatcgtctcaaactttgctaacaccttagagcagatcgttgcc
aatacacaggtcaagcatgtggtgctgaccagtcttggacagatgctgccacgcgccaaa
ggcacaattgtcgatttcgttgtgaaatacgtcaaaggcatggtacctaagtacgatcta
ccgggcgcgatttcgatgcgtaaagcgctgcacaaaggccgccgtctgcaatacgtgaag
ccgtttatgtccggtgaagacattgccttcctgcaatacactggcggtacaaccggtgtg
gcgaaaggcgccattctgacgcaccgcaacatggtcgcaaacgtgctgcaagccaaaggc
gcttacggccctgtgctgcaagagggtcgcgagctggtggtcaccgcactgccgctgtac
cacgtgtttgccttaaccgtaaactgcttgctgtttattgaaatgggtggccgcaactta
ttgatcactaacccgcgtgatataccgggctttgtgaaagagctgcaaaagtacccattt
acagccattaccggtgtaaacaccctgtttaatgcgctggtgaataacgaagatttccac
gagctcgacttcaaaaatatgaagctagcagttggtggtggtatggcggtacaacgcgct
gttgccgagcgttggaaaaagactaccggtgtccatttgctcgaaggctatggtttgacc
gagtgttcgccactggtgaccggcaacccatacgatttgacggattacacgggtgcgatt
ggtttaccagtaccgtcaaccgaagtgcggattgtggatgatgcgggtaatgtggtgcct
aacgatcaagttggtgagctgcaagtgcgtggtccacaagtcatgcaaggttactggcag
cgtcctgaagcgaccaaagaagtgctcaatgctgagggatggctttcaactggcgatatt
gtgaaattcgatgatcaaggtttgatccacattgttgatcgtaagaaagacatgattctg
gtttcaggctttaacgtttatccgaatgaaatcgaagatgtggtggcgctgcacggcaaa
gtgctagaagtcgcagcgattggtcaggctaacgatgtttctggcgaattggtgaagatt
tatgtggtgaagcgcgacccaagcttgaccaaagacgaagtgattgctcactgtcgtaag
catctgactggctacaaagtgccaaaactggttgaatttcgtgacgacctgccaaaaacc
aacgtgggcaaaatcctgcgtcgtgtgctgcgtgaagaaaatgacgcacagttggcagca
aaggcgaagcaaagcgcataa
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