Vibrio cholerae O1 M66-2: VCM66_1939
Help
Entry
VCM66_1939 CDS
T00891
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03030
DNA replication
vcm03430
Mismatch repair
vcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCM66_1939 (holB)
03430 Mismatch repair
VCM66_1939 (holB)
03440 Homologous recombination
VCM66_1939 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcm03032
]
VCM66_1939 (holB)
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_1939 (holB)
Enzymes [BR:
vcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VCM66_1939 (holB)
DNA replication proteins [BR:
vcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VCM66_1939 (holB)
DNA repair and recombination proteins [BR:
vcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VCM66_1939 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
ACP06242
UniProt:
C3LNW6
LinkDB
All DBs
Position
I:complement(2106298..2107272)
Genome browser
AA seq
324 aa
AA seq
DB search
MSNLNSLYPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQSE
PCGFCHSCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPA
DAMNESSANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLK
GQGITTPAYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNALSGDVNAQLKCIALIDA
DLTTHLYWVWCVLTDAQKIHFGVQQDYYPPASAALAGRFTYSKLHVQTASLERLMEQLNQ
FSGLNTELLLLQWLYQFSDEETCL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaatctcaattctctttacccttggttagttcccgtttggcagccttggcaagcg
ggattagctgcaggaaaaatctcgtcagcgacgttaattcaggcatcagaaggagtaggc
gttgagagtttggttgaactcatggcccgcaccttgatgtgtacgagtagccaaagtgag
ccatgcggtttttgccatagttgcggtctaatgcaatcgggaaatcatcccgactttcat
gttgttaagcctgaaaagatcgggaaatcgatcacggtggagcaaattcgccagatgaat
cgtatcgcccaagagtcgtcccagctctccggttatcgcttgattgtgattgagcctgcc
gatgcgatgaatgaatcttccgccaacgcgctactgaaaacgctcgaagagcctgcacca
aactgtctatttattttggttacctctcggattaagcatcttttgccgacgatagttagc
cgttgccaaagattagtgctccctgcgccaaccactgcgttggtggttgagtggctaaaa
gggcaggggatcacgacgcctgcttacgccttacatctttgcgcagattcaccgctcaaa
acccgtgcctttatgctagaagggggcgcggaaaaatatcatgagcttgaaagccaactg
atgaatgcgctgagtggcgatgtgaatgcgcaacttaaatgtatcgcactcatcgatgcc
gatctgaccacgcatttgtattgggtttggtgtgttttgaccgatgcgcaaaaaattcac
tttggtgtgcagcaagactattatcccccagcaagtgccgcattagctggccgttttacc
tattctaaacttcatgtgcagacagcgagcttggaaaggctgatggaacaattgaaccag
ttcagtggattgaatacagaactgctgttgctgcaatggttatatcaatttagtgatgag
gaaacatgtttgtag
DBGET
integrated database retrieval system
