Vibrio cholerae O1 M66-2: VCM66_2013
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Entry
VCM66_2013 CDS
T00891
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00020
Citrate cycle (TCA cycle)
vcm00190
Oxidative phosphorylation
vcm00650
Butanoate metabolism
vcm00720
Other carbon fixation pathways
vcm01100
Metabolic pathways
vcm01110
Biosynthesis of secondary metabolites
vcm01120
Microbial metabolism in diverse environments
vcm01200
Carbon metabolism
Module
vcm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcm_M00149
Succinate dehydrogenase, prokaryotes
vcm_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VCM66_2013 (sdhA)
00650 Butanoate metabolism
VCM66_2013 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VCM66_2013 (sdhA)
00720 Other carbon fixation pathways
VCM66_2013 (sdhA)
Enzymes [BR:
vcm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VCM66_2013 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
OPA3
Motif
Other DBs
NCBI-ProteinID:
ACP06315
UniProt:
C3LP39
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All DBs
Position
I:complement(2187295..2189061)
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AA seq
588 aa
AA seq
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MTIPVRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNS
HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGC
TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAM
AEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDYPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgactattccagttcgttcttttgacgccgtagtaatcggcgcaggtggtgcaggtatg
cgtgctgcactacaaatttctgagcaaggcctaacttgcgcactgctttcaaaagtgttt
ccaactcgttctcatacggtatccgctcaaggcggcattaccgtggctttgggtaactca
cataaagatgattggcagtggcatatgtatgacacggtaaaaggttccgactatatcggc
gaccaaaatgccatcgaatacatgtgtaaaaacggcccggaatccgtgattgaacttgag
cgcatggggctacctttttctcgttttgagaacggcacgatttatcagcgtccttttggc
ggtcagtcaaaagagttcggtggtgaacaagctgctcgtacggcagcagcagcagaccgt
actggtcatgctctactgcacacgctttaccaacaaaacgttaaacataaaaccaccatt
ttctcggaatggtatgcactggatctggtgaaaaaccaagatggtgctgtgctcggttgt
actgcaatctgcatggaaacaggcgaaatttgctacttcaaagccaaagcaacagtgctt
gcgacaggcggtgcaggtcgtatttacgcttcaaccaccaatgcacacattaacacgggc
gatggtgtcggtatggctttgcgtgctggcgtaccaatgcaagatatggaaatgtggcaa
ttccacccaacgggtatcgcgggtgctggcgttctggttacagaaggctgtcgtggcgaa
ggtggctatctgctgaataaagatggtgagcgtttcatggaacgttacgcgcctaacgct
aaagatctagcaggtcgcgacgtggttgcacgttcaatgatgatcgaaatccgtgaaggt
cgtggttgtgatggcccatggggtccacacatcaaactgaaactggatcatttaggtcgt
gatgtattggaatctcgcctaccgggtatctgtgaactatcacgtacctttgctcacgtg
gacccagtgaaagaacctattcctgttatcccaacctgtcactacatgatgggtggcgta
ccaacacaagtgtctggtcaagcgatcaaacaagacagccatggtaaagatgttgaagtc
caaggcttgtttgcttgtggtgaaatcgcttctgtatcggtacatggtgccaaccgttta
ggcggcaactcactgcttgatctggtggtatttggccgcgcaacgggtctacatcttggt
gaaactctgcgtgctcaagctgaggctcgccctgcgactgcatcggatatcgaagcttct
ctggctcgtactatgcgttgggaaaacagcaaaggtggcgaagatcctgtcgtgattcgt
aaagatctgcagcgctgcatgcaaaacaacttctcggtattccgtgaaggtaaggcgatg
gctgaggggctggaagagctcaaagtcatccgcgaacgtttgaaaaatgcccatctggcg
gacaaatcaaccgaatttaacactcaacgtattgagtgtttagagttggacaacctgatg
gaaacggcattttcgactgcagtagcggcaaactaccgtactgaaagccgtggtgcacat
gcgcgttttgactatccagagcgtgatgatgagaactggttgtgccactcaatctacaat
ccggaaacggaacagatgagtaagcgtgaggtcaatatgacaccggtttaccgtgacccg
ttcccgcctaaagtgcgtacatattaa
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