Vibrio cholerae O1 M66-2: VCM66_2060
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Entry
VCM66_2060 CDS
T00891
Symbol
flrA
Name
(GenBank) flagellar regulatory protein A
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02020
Two-component system
vcm02040
Flagellar assembly
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VCM66_2060 (flrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCM66_2060 (flrA)
09142 Cell motility
02040 Flagellar assembly
VCM66_2060 (flrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcm03000
]
VCM66_2060 (flrA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vcm02035
]
VCM66_2060 (flrA)
Transcription factors [BR:
vcm03000
]
Prokaryotic type
Helix-turn-helix
Other families
VCM66_2060 (flrA)
Bacterial motility proteins [BR:
vcm02035
]
Flagellar system
Flagellar assembly proteins
Others
VCM66_2060 (flrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
bpMoxR
HTH_50
Mg_chelatase
AAA
MCM
AAA_7
CUE
AAA_2
TIP49
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACP06362
UniProt:
C3LPE2
LinkDB
All DBs
Position
I:complement(2228333..2229790)
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AA seq
485 aa
AA seq
DB search
MQSLAKLLVIEDDAAIRLNLSVILEFVGEQCEVIESTQIDQINWSAVWGGCILGSLRGQA
LSEQLIQSLNHIPLLVANKQPYSLEEFPNYVGELDFPLNYPQLSDALRHCKEFLGRKGFQ
VLATARKNTLFRSLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSG
RRNGPFVPINCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPM
SMQVKLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPI
EMPALRDRIDDIPLLLQELMTRMEAEGAQPICFTPRAINSMMEHDWPGNVRELANLVERM
VILYPNSLVDVNHLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEF
VPDIDAPQALPPEGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRK
YNMQR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtttagcgaaactacttgtgattgaggacgatgccgcgatccggctcaatctc
agtgttattttagaatttgtaggagagcagtgtgaggtcattgagtctactcagattgac
caaatcaattggtcggcagtgtggggtgggtgcattttaggctcgctacgtggtcaagcg
ctttctgaacaattaatccaatctttaaaccatatcccgttgctggttgccaataagcag
ccttattccttagaagaattccccaactatgtgggtgagttagattttccgctcaactat
ccgcagctgagcgatgctttgcgtcactgtaaagaatttcttgggcgcaaaggttttcaa
gtccttgcgaccgcacgcaaaaacaccctgtttcgtagccttgttgggcaaagcatgggg
attcaagaagttcgccacttgattgagcaagtctcgaccacggaagccaacgtgctgatc
ctcggtgagtcgggcacgggtaaagaagtggttgcgcgtaacattcactaccattcagga
cgccgtaatggcccttttgtccccatcaactgtggtgcaatcccggctgaattgctggaa
agtgaactgtttggtcatgaaaaaggggcgtttaccggagcgattaccgcacgtaaaggc
cgttttgaactggctgaaggcggcacactctttttagatgaaattggcgatatgccgatg
agcatgcaggttaaactgctgcgcgtgctgcaagagcgctgttttgaacgggtgggaggc
aacagcaccatcaaagcgaatgtgcgcgtgattgccgcaacgcaccgtaatttggaagag
atgattgacggacagaaatttcgtgaagatctctactaccgcttaaacgtgttcccgatt
gaaatgcccgctctgcgcgatcggattgatgacattcctttgctgttacaagagctgatg
actcgtatggaagcggaaggggcgcagcccatctgtttcacgccgcgtgcgatcaattcg
atgatggagcatgactggccgggtaatgtgcgtgaacttgccaacttggttgagcgtatg
gtcatcctgtatccaaacagtttggtcgatgtgaatcacctgccgaccaaataccgttac
agtgatattccggaattccagccagagcctagccgttttagctcggttgaagagcaagag
cgtgatgtgttggaaggcatttttgcagaagactttaattttgaagagccgcaggagttt
gtccctgatatagatgcgccgcaagcgctgccacctgaaggggtgaatctcaaagagttg
ctcgctgatttagaagtgaacctcatcaaccaagcgttagaagcgcaagggggggtagtg
gcgagagcggcagacatgctcggtatgcgtcgcaccaccttggttgagaagatgcgcaaa
tacaacatgcaacgctag
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