Entry |
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Symbol |
recC
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Name |
(GenBank) exodeoxyribonuclease V, 125 kDa subunit
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KO |
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Organism |
vcm Vibrio cholerae O1 M66-2
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vcm00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VCM66_2245 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vcm03400]
VCM66_2245 (recC)
Enzymes [BR:vcm01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VCM66_2245 (recC)
DNA repair and recombination proteins [BR:vcm03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VCM66_2245 (recC)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
I:complement(2409537..2412983)
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AA seq |
1148 aa
MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASELGVAANL
EFPLPATFIWQMFTQVLPDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQPLQRYLQDDED
DSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVEIADQHPWQPILWRELYAYTHKQG
HSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRYIDALRAMGEHIDVHLML
TNPCQHYWGDIRDRKYLARVAAQKRKILQINGEQVTIGSEVSPLKGDVENYLQESMHLSH
AVGNSLLASMGKMGRDNLYLLAQNDQSELELFIEIQRDSLLHHIQADILHLQEHQDDAKF
ASSGHKPSIAAQDDSLQIALCHSPIREVEVLHDRLLAEFERDPSLKPRDVIVMVPDINAY
APYIQAVFGNAPGERFIPFSISDRSADQESPILTAFLQLLALPQSRCLASELLELLETPA
IMARFAIDEEEFATAKRWVEEAGIRWGLNSDTGAEFELPASEQNTWQFGIERMLLGYAMP
AEAGLYELGGQWLAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSMEQWRYWLNEL
LERCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAVSPAIIRQVLTNKLSGTRISQRF
LAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRY
LFLEALLSAKEQLYISYVGRSIQDNSERVPSVLVSELLEYCEQNYCLAGDENLESDDSGR
RLVEHLTTQYPMVPFSPQAFIAGSFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMEL
DLVELQRFWRLPVEYFFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLACR
DGAERDQVVAQFAKQQRAQGKLPVAAFGDLELAQSAQQALALAEKIGFLCHQPLEDEEID
LRLQPFDDGREVLLRGWLVKRYQSGLVRARSGAIRSEDLLAAWIDHLCLAASGKAVTTHL
IGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPKTALACVEAGFSRG
KWQEDEEKSYKKMADTFNDSFYIKGEGGNRYIARIWPQWSDELAKTLRQLAIKVLQTPRL
QVQDAEQV |
NT seq |
3447 nt +upstreamnt +downstreamnt
gtgtttacggtctaccactccaaccaagttgaaacgctgaagatcctgttggtgcattta
atcaaaaatgaaccgttggacgatccctttattcctgagagcattttggtgcaaagcccc
ggcatgtcgcagtggctgaaaatggcgctggccagtgaattaggggttgccgcgaatctt
gagtttcctctaccggcaacctttatctggcagatgtttactcaagtgttgcccgatgtg
ccgcagcgcagcgccttcaataaagaagccatgagttggcgtttgatggagctactgcct
aagctgcttgaccgcaccgaattccaaccgctgcaacgctatttacaagacgatgaagat
gattctaagcgcttccaattagcggaaaaaattgccgatatttttgatggttacttggtg
tatcgccccgattggattttaagttgggaagcaggggaagacgtggtggaaatcgctgac
caacacccgtggcagccgattttgtggcgtgaactctacgcttacacgcataagcaaggg
cactcgatttatcaccgtgccaacctctatcagcgttttattgagcagttggcgagtggc
gactttgatcgcagcacatggcctaagcgcttgttcatcttcggtatttctgcgctgccg
ccccgttatattgatgcgctgcgtgcgatgggggagcatatcgatgtgcacctgatgctg
accaacccttgtcagcactattggggcgacatccgtgaccgtaaatatctggcgcgagtg
gcagcgcaaaaacgcaaaatcctgcaaattaatggtgagcaagtcaccatcggcagtgaa
gtctcgccgctcaaaggcgatgtggaaaactatctgcaagagtcgatgcacctgagtcac
gcggtgggcaatagcttactggcttcgatgggcaaaatggggcgcgataatctctatctt
cttgcacaaaacgatcagtctgaattagagctgtttattgagattcaacgcgactcgctg
ctgcatcacatccaagcagatattttgcatctgcaagagcatcaagacgatgccaagttt
gccagcagcggtcataaacccagcattgccgcgcaggatgattccctgcagattgcccta
tgtcacagcccaattcgtgaagtagaagtgctgcacgaccgactgctggccgagtttgag
cgtgaccctagcctaaaaccgcgcgatgtaattgtgatggtgccagacattaacgcctac
gcgccttacattcaggcggtgtttggcaatgcgcccggcgagcgttttattccgttttca
atttccgatcgcagcgccgatcaagaaagcccgattttaaccgccttcttgcaactgctc
gcgctgccgcaatcacgctgtctggcttctgaactgcttgagctacttgaaaccccggcg
attatggcgcgttttgcgattgacgaagaagagtttgccactgccaaacgttgggtcgaa
gaagcgggcattcgttgggggctgaatagtgacactggcgcagagtttgaattgcccgcc
agtgaacaaaatacgtggcagtttggcattgaacgtatgttactgggttacgccatgccg
gctgaagcggggttgtatgaacttggcggccagtggcttgccccctataaccaagtgcaa
ggcatgagcgccgagttggcgggtaagctagcacactttgtgcaaacgctcagcgagctg
cgtagccaactggcgcaaactcaaagcatggagcagtggcgttattggctcaacgagctg
ctagagcgctgttttagtgtcgatctgcaaggtgagctggcgctgaaaaccatccgcgat
agtttggtgaacctaaaacagcagttggccgacgcgggctaccaacaagcggtttcaccg
gccatcattcgccaagtgctgaccaataaactctccggcacgcggattagccaacgcttt
ttagcgggacaagtgaacttctgtaccctgatgccgatgcgttcgatcccgtttcgccga
gtttgcctgcttggcatgaatgatggtgtttatccacccaatgaaatggtggaagggttt
gacctgcgcaatgtgcagcgccgagtcggcgaccgttcacggcgtgaagagtcgcgctac
ctgttcctcgaagccttgttgtcagccaaagagcagctgtatatcagctatgtcggccgc
tcgattcaagataacagcgaacgcgtgccttcagtgctggtcagtgagcttttggaatat
tgcgagcagaactactgcttggctggcgatgaaaatctagaaagtgatgactccggacgt
cgcttggttgagcacttaaccacccagtatcctatggtgccgttcagcccgcaggcgttt
atcgctggcagttttgcccgtgaatggctacctgccgcgcgccgccaagggcagagtagc
gccgattttctcacgccactcagtgattatctgctcgaagtgagttggccgatggagctg
gatctggtcgagctgcaacgtttttggcgtctgccggtggagtatttcttcaaacgccgc
ttgaaagtgagctttgagccgccgctggccgtgctggaagacgatgagccgtttgctttg
gatggattgagcgcgtatcagctgcgtgatgagttggtggaaaatctgctcgcttgccgt
gatggcgcagagcgcgaccaagtggtggcgcagtttgctaagcagcaacgagcgcaaggc
aagttgcctgtggcagcgtttggcgatcttgaattggcgcaaagtgcgcagcaagctttg
gcgctggcggaaaaaattggctttttgtgtcaccaaccactggaagatgaagagattgat
ctacgcttacagccctttgacgatggccgagaagtcttactacgtggttggctcgtgaag
cgttatcaatctggcttggtgcgcgcacgcagtggcgcgattcgctcggaagatttatta
gccgcatggattgatcatctctgcttggcggcgagcggcaaagccgtcacgacccatttg
attggttatgagcgcaaagaaggagtgcagcaccaaatgctgccgccacttaatgacgcg
cagcaagccaagacgctactgagtgaactggtggcgctgttttgccaaggcatgaaccag
cctttggcttatttcccgaaaacggcgttggcttgcgttgaggccggattttcccgtggc
aaatggcaggaagatgaagagaagtcctacaagaaaatggcggacaccttcaacgatagc
ttttacatcaagggtgaaggcggtaatcgctacatcgcgcgtatttggccgcagtggagt
gatgaactggcaaaaacgctgcgccaattggccatcaaagtgctgcaaacaccgcgttta
caagtgcaagatgccgaacaggtttaa |