Vibrio cholerae O1 M66-2: VCM66_2266
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Entry
VCM66_2266 CDS
T00891
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vcm
Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_2266 (radA)
DNA repair and recombination proteins [BR:
vcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VCM66_2266 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
Rad51
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
AAA
AAA_22
AAA_16
AAA_14
RecA
AAA_29
Zn_ribbon_Thio2
NTPase_1
AAA_24
DUF7125
AAA_5
Viral_helicase1
Zeta_toxin
Zn_ribbon_8
nSTAND3
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ACP06567
UniProt:
C3LQB5
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Position
I:complement(2434768..2436147)
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AA seq
459 aa
AA seq
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MIVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEA
KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSG
QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSI
LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgattgtgaaagctaagcgcgcctatgtatgtaatgaatgtggagcggattttccgcgt
tggcaaggacagtgtaatgcctgtggttcgtggaattcgatttcagaagttcgtttagcg
gcttcaccgcaagtggcgcgcaatgaaaggttggtcggttatgcgggagctcttgaagcg
aaagtacaaactttggctgatattgatttacaagaagtgcctcgattcaccagtggcttt
aaagaactagatcgcgtacttggcggcggaattgtgccgggtgcggcgattttgattggt
ggtaatccgggcgcgggtaaatcgaccttactactgcaaaccatgtgtttactttccgga
cagatgccgacgttgtacgtgacgggcgaagaatcgttgcagcaggtcgcgatgcgtgct
tcacggcttggtttgccgaaacagcatctaaaaatgctctcagaaaccaatgtggatcgg
atttgccagattgctgagcaagaaaagccgcgcattatggtcatcgattcgattcaagtg
atgcatgtggcggatgtgcaatcgtcaccggggagtgtcgcgcaagtgcgtgagtcggcc
acggcgcttacgcgttatgctaaacaaaataatgtggcggtatttattgtgggccacgta
accaaagatggtacgttggcgggacctaaagttcttgaacacatcatcgattgctcgatt
ctgcttgatggcgataccgacagccgttttcgtacactccgtagtcataaaaaccgtttt
ggtgcggtcaatgaactcggtgtgtttgcgatgactggacaagggatgcgtgaggtgagt
aatccatcggcgattttcctttctcgtggagaagaagccacatctggtagctcagtgatg
gtggtgtgggaaggaactcgcccactcttagttgagattcaagcgttggtcgattactca
caactcgctaacccacgacgcgttgcggttggcttagaacaaaaccgtctctctttatta
ctggccgtgctgcataaacacggtggtttgcaaatggccgatcaggatgtgtttgtgaac
gtagtcggtggcgtgaaagtgacggagaccagtgcagatttagcgctactcatggcgtta
ttgtcgagttttcgtgatcgtccgctgccaaaagatgtcgtggtttttggtgaagtcgga
ttggctggagaaattcgtcccgtaccgagtggtcaagagcgccttaacgaagccttcaaa
catggttttaagaaagcgattgtgccgattgccaatatgccgaaaggtggtattgaaggt
atgcagatccacggtgtgaaaaagctttctgatgcgatcgcggcttttgatgagctgtaa
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