Vibrio cholerae O1 M66-2: VCM66_2312
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Entry
VCM66_2312 CDS
T00891
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00220
Arginine biosynthesis
vcm00240
Pyrimidine metabolism
vcm00250
Alanine, aspartate and glutamate metabolism
vcm01100
Metabolic pathways
vcm01110
Biosynthesis of secondary metabolites
vcm01240
Biosynthesis of cofactors
Module
vcm_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VCM66_2312 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VCM66_2312 (carB)
00220 Arginine biosynthesis
VCM66_2312 (carB)
Enzymes [BR:
vcm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VCM66_2312 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
GSH-S_ATP
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACP06612
UniProt:
C3LQT4
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All DBs
Position
I:complement(2491064..2494294)
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AA seq
1076 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDA
LTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG
FAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKSDT
AYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQ
AIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASVTSVQELHARVKANQA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagcatccttatccttggtgcgggtccaattgttatc
ggtcaggcttgtgagtttgactactcaggcgcgcaagcgtgtaaagccctgcgcgaagag
ggttaccgcgttattctggttaactcaaacccagcgaccatcatgactgacccagaaatg
gccgatgcgacttacatcgagcctatccactgggaagtggtgcgtaagatcatcgaaaaa
gagcgcccagatgcgattttgcccaccatgggcggccagactgcgctgaactgtgcgctg
gcactcgaaaaacatggcgtattggctgagtttggcgttgagatgatcggcgcaaccgcc
gatgcgattgataaagcggaagaccgctcacgctttgataaagcgatgaaatcaatcggc
ctagagtgtcctcgcgctgataccgcaaaaagcatggaagaagcgtacaaagtcctcgat
atggttggcttcccatgtatcatccgtccttctttcaccatgggcggcagcggtggtggt
atcgcttacaaccgtgaagagtttgaagaaatctgtactcgcggtctggatctttcaccg
accaatgaactgctgatcgatgaatcactgattggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgataactgcatcatcgtctgtgcgattgaaaacttcgacccaatg
ggcatccacacgggtgactcgatcactgtcgctccagcgcaaacgctaactgacaaagaa
taccaaatcatgcgtaacgcctctttggcggtactgcgtgaaatcggcgtagaaaccggc
ggttcaaacgttcagtttggtatcaacccgaaagatggccgcatggtgatcatcgagatg
aatccacgtgtatcgcgctcttctgcgttggcttcaaaagccaccggtttcccaattgcg
aaagtggcggccaaactggcagtgggtttcactctggatgagttgatgaacgacatcaca
ggcggcgcaacaccagcctcgttcgaaccgaccatcgactacgtggtcactaagatccct
cgtttcaacttcgaaaaattcgccggtgccaatgaccgtctgactacacaaatgaagtca
gtaggtgaggtgatggcgattggtcgtaaccaacaagaatcactgcaaaaagcactgcgc
ggcttggaagtgggtgcggctggtctggatgagaaagtggatctggacgcgccagacgct
ctgaccaaaattcgttatgagctgaaagaagcaggcgcagagcgtatttggtacatcgcg
gatgcattccgtgccggtatgtcagtggatggggtatttaacctgaccaacatcgatcgc
tggttcctagtgcaaattgaagaactggtgaagctggaagccgaagtgaaagccggtggc
tttgcgggcttgaaccaagacgtactgcgtaagatgaagcgcaaaggcttctctgatgcg
cgtttgtcaaaactgctcggcgtgagcgaaaacgaaatccgtcgtctgcgtgaccaatac
aacatccacccagtttacaagcgtgtggatacctgcgcggcagaatttaagtcagatacg
gcttacatgtactccacgtatgatgaagagtgtgaagccaatccgactgacaaagacaag
atcatggtgctgggcggtggtccaaaccgtatcggtcaaggtatcgagtttgactactgc
tgtgtacacgccgcgcttgcactgcgtgaagatggttacgaaaccatcatggttaactgt
aacccagaaaccgtatcaaccgattacgacacctcagatcgcctctactttgagcctgta
actctagaggatgtgctggctatcgtgcgtgttgagaagccaaaaggcgtgatcgtgcag
tacggcggtcaaacaccactgaaactggcgcgagcgctggaagcggctggcgtacctgtg
attggtaccagcccagatgcgattgaccgcgctgaagaccgtgaacgtttccaacaagcg
gtacagcgtttaggcctcaaacagccagacaacgcaaccgtaaccgctatcgagcaagcg
attgagaagtcgcgtgaaatcggtttcccactcgtagttcgcccctcttatgttctgggt
ggccgtgcgatggagattgtgtacgatgagcaagatctgcgtcgttacttcaacgaagcg
gtgagcgtgtcgaatgaatcaccagttctgctggatcgcttccttgatgatgcaaccgaa
gtggacgtggatgcgatttgtgacggtgagcgcgtggtgattggcggcatcatggagcac
attgaacaagcgggtgttcactcaggtgactcagcctgttctctgccggcttacaccttg
agccaagaaatccaagacaagatgcgtgagcaagttgagaagttggcatttgaactcggt
gttcgtggcctgatgaacattcagtttgcagtcaaagacaacgaagtttacctgattgaa
gtaaacccacgtgctgcgcgtactgtgccgtttgtttctaaagcaaccggtgctccgctg
gcgaaaatcgcggcgcgcgtgatggttggacaaactctggagcaacaaggcttcaccaaa
gagatcattccaccttactactcagttaaagaagtggttctgccgttcaacaagttcccg
ggggttgacccactgcttggccctgaaatgcgctcaaccggtgaagtgatgggtgtgggt
gccacgtttgctgaagcctatgctaaagcagagttgggctgtggctcggtttaccctgaa
ggtggtcgtgcgctactttcggtgcgtgaaggtgacaaacagcgtgtagtggatctggct
tctaagctagtgaaactgggttaccagttggatgcgactcacggtactgcagtgattctg
ggcgaagcgggcatcaacccacgtctggttaacaaagtgcatgaaggtcgtccacacatt
ctggatcgcatcaaaaaccacgagtacacctacattgtgaacacggcttctggccgccaa
gcaattgaagactcaaaagtactgcgccgtggtgcattggctcacaaagtgaactacacc
accacactgaacgccgccttcgcaacttgtatgtcacacacggcggatgccaaagcatcc
gtcacttcagtacaagagctgcatgcgcgtgtaaaagcgaaccaagcttaa
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