KEGG   Vibrio cholerae O1 M66-2: VCM66_2335
Entry
VCM66_2335        CDS       T00891                                 
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm00010  Glycolysis / Gluconeogenesis
vcm00020  Citrate cycle (TCA cycle)
vcm00260  Glycine, serine and threonine metabolism
vcm00280  Valine, leucine and isoleucine degradation
vcm00310  Lysine degradation
vcm00380  Tryptophan metabolism
vcm00620  Pyruvate metabolism
vcm00630  Glyoxylate and dicarboxylate metabolism
vcm00640  Propanoate metabolism
vcm00670  One carbon pool by folate
vcm00785  Lipoic acid metabolism
vcm01100  Metabolic pathways
vcm01110  Biosynthesis of secondary metabolites
vcm01120  Microbial metabolism in diverse environments
vcm01200  Carbon metabolism
vcm01210  2-Oxocarboxylic acid metabolism
vcm01240  Biosynthesis of cofactors
Module
vcm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vcm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vcm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    VCM66_2335 (lpdA)
   00020 Citrate cycle (TCA cycle)
    VCM66_2335 (lpdA)
   00620 Pyruvate metabolism
    VCM66_2335 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    VCM66_2335 (lpdA)
   00640 Propanoate metabolism
    VCM66_2335 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VCM66_2335 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    VCM66_2335 (lpdA)
   00310 Lysine degradation
    VCM66_2335 (lpdA)
   00380 Tryptophan metabolism
    VCM66_2335 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    VCM66_2335 (lpdA)
   00670 One carbon pool by folate
    VCM66_2335 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcm04147]
    VCM66_2335 (lpdA)
Enzymes [BR:vcm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     VCM66_2335 (lpdA)
Exosome [BR:vcm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   VCM66_2335 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA AlaDh_PNT_C NAD_binding_8 FAD_binding_2 Thi4 HI0933_like FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: ACP06633
UniProt: C3LQV5
LinkDB
Position
I:complement(2518322..2519749)
AA seq 475 aa
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFT
GPNTIEVEGEEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKSAPAQAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFIRVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaagtcgtggtgcttggtgccggtcctgctggttactcc
gccgcattccgctgtgcagacttaggtctggataccgtcatcatcgaacgttacaacacg
ctaggtggtgtgtgtttgaacgttggttgtattccttctaaagcactgctgcacgtggca
aaagtgattgaagaagccaaagcgctgactgagcacggtatcgtgtttggcgagccaaag
acagacatcgacaaagttcgtctgtggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcaaaaatgcgtaaagtgaacgtagtgaacggctacggtaaattcacc
ggcccgaacactattgaagtggaaggcgaagagggcaaaactgtcgtaactttcgataac
gcgatcgttgctgcaggttctcgtccaatcaaactgccattcattccgcatgaagaccca
cgtatttgggattcaactgatgcgctggaactgaaagaagtgcctggaaaactgctgatc
atgggcggcggtatcatcggcctggaaatggcgaccgtttaccattcactgggttctaaa
attgatgtagttgagatgtttgaccaacttatccctgctgcggataaagacatggttaaa
gtctataccaaacgcatcaaagataagttcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagagcgcaccagcacaa
gctgagcgttacgatgcggttctggttgcaattggccgtgtaccaaacggtaaactactg
gatgctgagaaagcgggtctggaagtggacgagcgtggctttatccgcgtggataagcaa
atgcgcactaacgttccgcacatcttcgcgatcggtgacatcgtgggtcaaccaatgcta
gcacataaaggcgtgcatgaaggccacgtagcggcagaagtgatctctggtaagaagcac
tacttcgatccaaaagtgatcccatccatcgcttacactgagccagaagtggcttgggtt
ggtaagacagaaaaagaagcaaaagcagaaggcatcaactatgaagttgctactttccca
tgggcagcctctggccgtgcgattgcttctgactgtgcagacggtatgactaagcttatc
ttcgataaagagactcatcgtgtgatcggtggtgctatcgtaggtactaacggtggtgaa
ctgttgggtgaaatcggtctggcgatcgagatgggctgtgatgcagaagacatcgcactg
accattcacgctcacccaacgctgcatgagtctgtgggtctggccgctgaagtcttcgaa
ggcaccatcactgacctgccaaacgctaaagcgaaaaagaaaaagtaa

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