Entry |
|
Symbol |
lpdA
|
Name |
(GenBank) pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
|
KO |
|
Organism |
vcm Vibrio cholerae O1 M66-2
|
Pathway |
vcm00260 | Glycine, serine and threonine metabolism |
vcm00280 | Valine, leucine and isoleucine degradation |
vcm00630 | Glyoxylate and dicarboxylate metabolism |
vcm01110 | Biosynthesis of secondary metabolites |
vcm01120 | Microbial metabolism in diverse environments |
vcm01210 | 2-Oxocarboxylic acid metabolism |
|
Module |
vcm_M00011 | Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate |
vcm_M00307 | Pyruvate oxidation, pyruvate => acetyl-CoA |
|
Brite |
KEGG Orthology (KO) [BR:vcm00001]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VCM66_2335 (lpdA)
00020 Citrate cycle (TCA cycle)
VCM66_2335 (lpdA)
00620 Pyruvate metabolism
VCM66_2335 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VCM66_2335 (lpdA)
00640 Propanoate metabolism
VCM66_2335 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCM66_2335 (lpdA)
00280 Valine, leucine and isoleucine degradation
VCM66_2335 (lpdA)
00310 Lysine degradation
VCM66_2335 (lpdA)
00380 Tryptophan metabolism
VCM66_2335 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VCM66_2335 (lpdA)
00670 One carbon pool by folate
VCM66_2335 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:vcm04147]
VCM66_2335 (lpdA)
Enzymes [BR:vcm01000]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VCM66_2335 (lpdA)
Exosome [BR:vcm04147]
Exosomal proteins
Exosomal proteins of breast cancer cells
VCM66_2335 (lpdA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
I:complement(2518322..2519749)
|
AA seq |
475 aa
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFT
GPNTIEVEGEEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKSAPAQAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFIRVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK |
NT seq |
1428 nt +upstreamnt +downstreamnt
atgagcaaagaaattaaagcccaagtcgtggtgcttggtgccggtcctgctggttactcc
gccgcattccgctgtgcagacttaggtctggataccgtcatcatcgaacgttacaacacg
ctaggtggtgtgtgtttgaacgttggttgtattccttctaaagcactgctgcacgtggca
aaagtgattgaagaagccaaagcgctgactgagcacggtatcgtgtttggcgagccaaag
acagacatcgacaaagttcgtctgtggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcaaaaatgcgtaaagtgaacgtagtgaacggctacggtaaattcacc
ggcccgaacactattgaagtggaaggcgaagagggcaaaactgtcgtaactttcgataac
gcgatcgttgctgcaggttctcgtccaatcaaactgccattcattccgcatgaagaccca
cgtatttgggattcaactgatgcgctggaactgaaagaagtgcctggaaaactgctgatc
atgggcggcggtatcatcggcctggaaatggcgaccgtttaccattcactgggttctaaa
attgatgtagttgagatgtttgaccaacttatccctgctgcggataaagacatggttaaa
gtctataccaaacgcatcaaagataagttcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagagcgcaccagcacaa
gctgagcgttacgatgcggttctggttgcaattggccgtgtaccaaacggtaaactactg
gatgctgagaaagcgggtctggaagtggacgagcgtggctttatccgcgtggataagcaa
atgcgcactaacgttccgcacatcttcgcgatcggtgacatcgtgggtcaaccaatgcta
gcacataaaggcgtgcatgaaggccacgtagcggcagaagtgatctctggtaagaagcac
tacttcgatccaaaagtgatcccatccatcgcttacactgagccagaagtggcttgggtt
ggtaagacagaaaaagaagcaaaagcagaaggcatcaactatgaagttgctactttccca
tgggcagcctctggccgtgcgattgcttctgactgtgcagacggtatgactaagcttatc
ttcgataaagagactcatcgtgtgatcggtggtgctatcgtaggtactaacggtggtgaa
ctgttgggtgaaatcggtctggcgatcgagatgggctgtgatgcagaagacatcgcactg
accattcacgctcacccaacgctgcatgagtctgtgggtctggccgctgaagtcttcgaa
ggcaccatcactgacctgccaaacgctaaagcgaaaaagaaaaagtaa |