Vibrio cholerae O1 M66-2: VCM66_2335
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Entry
VCM66_2335 CDS
T00891
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00010
Glycolysis / Gluconeogenesis
vcm00020
Citrate cycle (TCA cycle)
vcm00260
Glycine, serine and threonine metabolism
vcm00280
Valine, leucine and isoleucine degradation
vcm00310
Lysine degradation
vcm00380
Tryptophan metabolism
vcm00620
Pyruvate metabolism
vcm00630
Glyoxylate and dicarboxylate metabolism
vcm00640
Propanoate metabolism
vcm00670
One carbon pool by folate
vcm00785
Lipoic acid metabolism
vcm01100
Metabolic pathways
vcm01110
Biosynthesis of secondary metabolites
vcm01120
Microbial metabolism in diverse environments
vcm01200
Carbon metabolism
vcm01210
2-Oxocarboxylic acid metabolism
vcm01240
Biosynthesis of cofactors
Module
vcm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vcm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VCM66_2335 (lpdA)
00020 Citrate cycle (TCA cycle)
VCM66_2335 (lpdA)
00620 Pyruvate metabolism
VCM66_2335 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VCM66_2335 (lpdA)
00640 Propanoate metabolism
VCM66_2335 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCM66_2335 (lpdA)
00280 Valine, leucine and isoleucine degradation
VCM66_2335 (lpdA)
00310 Lysine degradation
VCM66_2335 (lpdA)
00380 Tryptophan metabolism
VCM66_2335 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VCM66_2335 (lpdA)
00670 One carbon pool by folate
VCM66_2335 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcm04147
]
VCM66_2335 (lpdA)
Enzymes [BR:
vcm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VCM66_2335 (lpdA)
Exosome [BR:
vcm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VCM66_2335 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
AlaDh_PNT_C
NAD_binding_8
FAD_binding_2
Thi4
HI0933_like
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
ACP06633
UniProt:
C3LQV5
LinkDB
All DBs
Position
I:complement(2518322..2519749)
Genome browser
AA seq
475 aa
AA seq
DB search
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFT
GPNTIEVEGEEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKSAPAQAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFIRVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagtcgtggtgcttggtgccggtcctgctggttactcc
gccgcattccgctgtgcagacttaggtctggataccgtcatcatcgaacgttacaacacg
ctaggtggtgtgtgtttgaacgttggttgtattccttctaaagcactgctgcacgtggca
aaagtgattgaagaagccaaagcgctgactgagcacggtatcgtgtttggcgagccaaag
acagacatcgacaaagttcgtctgtggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcaaaaatgcgtaaagtgaacgtagtgaacggctacggtaaattcacc
ggcccgaacactattgaagtggaaggcgaagagggcaaaactgtcgtaactttcgataac
gcgatcgttgctgcaggttctcgtccaatcaaactgccattcattccgcatgaagaccca
cgtatttgggattcaactgatgcgctggaactgaaagaagtgcctggaaaactgctgatc
atgggcggcggtatcatcggcctggaaatggcgaccgtttaccattcactgggttctaaa
attgatgtagttgagatgtttgaccaacttatccctgctgcggataaagacatggttaaa
gtctataccaaacgcatcaaagataagttcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagagcgcaccagcacaa
gctgagcgttacgatgcggttctggttgcaattggccgtgtaccaaacggtaaactactg
gatgctgagaaagcgggtctggaagtggacgagcgtggctttatccgcgtggataagcaa
atgcgcactaacgttccgcacatcttcgcgatcggtgacatcgtgggtcaaccaatgcta
gcacataaaggcgtgcatgaaggccacgtagcggcagaagtgatctctggtaagaagcac
tacttcgatccaaaagtgatcccatccatcgcttacactgagccagaagtggcttgggtt
ggtaagacagaaaaagaagcaaaagcagaaggcatcaactatgaagttgctactttccca
tgggcagcctctggccgtgcgattgcttctgactgtgcagacggtatgactaagcttatc
ttcgataaagagactcatcgtgtgatcggtggtgctatcgtaggtactaacggtggtgaa
ctgttgggtgaaatcggtctggcgatcgagatgggctgtgatgcagaagacatcgcactg
accattcacgctcacccaacgctgcatgagtctgtgggtctggccgctgaagtcttcgaa
ggcaccatcactgacctgccaaacgctaaagcgaaaaagaaaaagtaa
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