Vibrio cholerae O1 M66-2: VCM66_2384
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Entry
VCM66_2384 CDS
T00891
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VCM66_2384 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_2384 (rnc)
03009 Ribosome biogenesis [BR:
vcm03009
]
VCM66_2384 (rnc)
03036 Chromosome and associated proteins [BR:
vcm03036
]
VCM66_2384 (rnc)
Enzymes [BR:
vcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VCM66_2384 (rnc)
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VCM66_2384 (rnc)
Ribosome biogenesis [BR:
vcm03009
]
Eukaryotic type
90S particles
RNase
VCM66_2384 (rnc)
Prokaryotic type
rRNA processing factors
VCM66_2384 (rnc)
Chromosome and associated proteins [BR:
vcm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VCM66_2384 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ACP06682
UniProt:
C3LR04
LinkDB
All DBs
Position
I:complement(2580527..2581204)
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AA seq
225 aa
AA seq
DB search
MTPPMNKLTSKLGYTFKETELLNLALTHRSANGKHNERLEFLGDSILSFVIADELYRRFP
KVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLETARSIVLEWYHGRLEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccaatgaataaattaacaagtaagctcggttatacctttaaggagactgag
ctgcttaatctggcgctgacacaccgcagcgccaatggtaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgagctctatcgccgcttcccg
aaagtgaatgagggagatatgagccgcatgcgtgccaccttagtgcgtggtaacacgttg
gcggagctgggtcgtgaattcgatctgggagattacttaaaattaggtccaggtgagttg
aaaagtggtggttttcgccgagactcgattctagcggatgcggtggaagcgatcatcggt
gcgatctaccttgacagcgatctggaaacggcgcgcagcattgtgcttgagtggtatcac
ggtcgtctggaagagattaaaccgggcgcatcacaaaaagacccgaaaactcgcttacaa
gagtttttgcagggcagaagaaaaccgctgcccgtctacacagtgactaatattaaaggt
gaagcacacaaccaagagtttaccgttgcgtgtgaagtggcaggtatggatacgcctgtg
atcggtaaaggcaccagccgccgcaaggcagagcaagcggctgcagaaacggctctggag
caattgaccaatggctga
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