KEGG   Vibrio cholerae O1 M66-2: VCM66_2384
Entry
VCM66_2384        CDS       T00891                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VCM66_2384 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcm03019]
    VCM66_2384 (rnc)
   03009 Ribosome biogenesis [BR:vcm03009]
    VCM66_2384 (rnc)
   03036 Chromosome and associated proteins [BR:vcm03036]
    VCM66_2384 (rnc)
Enzymes [BR:vcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     VCM66_2384 (rnc)
Messenger RNA biogenesis [BR:vcm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VCM66_2384 (rnc)
Ribosome biogenesis [BR:vcm03009]
 Eukaryotic type
  90S particles
   RNase
    VCM66_2384 (rnc)
 Prokaryotic type
  rRNA processing factors
   VCM66_2384 (rnc)
Chromosome and associated proteins [BR:vcm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     VCM66_2384 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: ACP06682
UniProt: C3LR04
LinkDB
Position
I:complement(2580527..2581204)
AA seq 225 aa
MTPPMNKLTSKLGYTFKETELLNLALTHRSANGKHNERLEFLGDSILSFVIADELYRRFP
KVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLETARSIVLEWYHGRLEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq 678 nt   +upstreamnt  +downstreamnt
atgacacctccaatgaataaattaacaagtaagctcggttatacctttaaggagactgag
ctgcttaatctggcgctgacacaccgcagcgccaatggtaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgagctctatcgccgcttcccg
aaagtgaatgagggagatatgagccgcatgcgtgccaccttagtgcgtggtaacacgttg
gcggagctgggtcgtgaattcgatctgggagattacttaaaattaggtccaggtgagttg
aaaagtggtggttttcgccgagactcgattctagcggatgcggtggaagcgatcatcggt
gcgatctaccttgacagcgatctggaaacggcgcgcagcattgtgcttgagtggtatcac
ggtcgtctggaagagattaaaccgggcgcatcacaaaaagacccgaaaactcgcttacaa
gagtttttgcagggcagaagaaaaccgctgcccgtctacacagtgactaatattaaaggt
gaagcacacaaccaagagtttaccgttgcgtgtgaagtggcaggtatggatacgcctgtg
atcggtaaaggcaccagccgccgcaaggcagagcaagcggctgcagaaacggctctggag
caattgaccaatggctga

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