Vibrio cholerae O1 M66-2: VCM66_2421
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Entry
VCM66_2421 CDS
T00891
Name
(GenBank) putative Inner membrane protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCM66_2421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcm02000
]
VCM66_2421
Transporters [BR:
vcm02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
VCM66_2421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Form-deh_trans
Motif
Other DBs
NCBI-ProteinID:
ACP06718
UniProt:
C3LR40
LinkDB
All DBs
Position
I:complement(2621230..2622300)
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AA seq
356 aa
AA seq
DB search
MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPR
DVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGE
WGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDEN
KKLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTV
KPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT
MGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRKL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaaattcttgattggtatatcggccgcactattgttgctacgacagccttggta
ctggttacctttgttggcctctctggcatcatcaaatatgttgagcagctccgtaaagtg
ggtgagggaagctacgatttattgcaagccttgttgtttgtggttctgagtattcctcgt
gatgtggaaatgtttttcccgatggcggctctattgggcgcacttatcggtttgggtgca
ttggcttccagctctgaattggtggtgatgcaggctgctggtttttctaagcttgatatt
ggcctttccgttcttaaaaccgccattccgctgatgattattgtcaccttactcggagag
tggggcgcaccacaagcgcaaaaaatggcacgtgatatgcgcgcatttgccacctcgggt
ggtgcgattatgtcggtgcgtactggggtttgggcacgggatgcgaatgattttatcttt
atcgccaaagttgaaaacgaacatttgtatggattgaatctgtggcgctttgacgaaaat
aaaaaactgagtacggtaattttttccgagcaagtcgattacgttgctaacaatgaatgg
ctgatgaaagatgcagtattgacccgtttggtgaatgacatcgagatcagtaaagaatcg
ttgcctgagtaccgctggcgaacctcccttgctccagacaaacttgccgtagtgacggtt
aagccggaagagttatctctcactggcttaagtgattacgtgcattacttaaaagcatca
gagcaagactcatcgcgttatgagttggctttgtggcgcaaagtgactcagccgatctcg
attgcggtgatgatgttgatggcgttgtcgttcatttttggcccactgcgtagcgtcacc
atgggggcgcggattttatctggcgtcattgccggatttagtttctacatctcaagtgag
ttctttggcccactcagtttggtgtatggattaccgccattgtttggtgcgctagcgcca
agcttagttttcttagccatcgcgttagggctattgggtagaaagctataa
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