Vibrio cholerae O1 M66-2: VCM66_2453
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Entry
VCM66_2453 CDS
T00891
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
vcm
Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_2453
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VCM66_2453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
DUF7049
AAA_18
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACP06750
UniProt:
C3LRJ5
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All DBs
Position
I:2651185..2652045
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AA seq
286 aa
AA seq
DB search
MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL
PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL
EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD
YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR
SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQIRHTSLEKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcgtggtcagcggacaatcgggagccggtaagagcgtcgctcttcgagta
ctcgaagaccttggttactactgtgtcgataacctgcccgtcagcctgctgacagccttt
atccagtcggttcaaggcagtcaacaaaacgtggcggttagcattgatatccgcaatctg
cccaaagagccaagcttggtacaagatgtactcgaccagctcaagcagaacaacgatgtc
agcatgctgtttctcgacgccagtaaagagaccttgctcaaacgctacagtgaaacacgg
cgcattcatcccctctctctcagtcaaagcaagccttcacttgcccaagccattgagtta
gaaaaacagctgcttggcccactcaaagagcaggcagacttgttgctcgacagcagtaac
cagtcgctgcatgagctgagcgaaacggtgcgtatgcgcattgaaggccgtgagcgcaaa
gaccttgtgatggtgtttcagtcgtttggctttaagtacggtttaccaaccgatgccgac
tacgtgtttgatgtgcgctttctccccaatccccattgggaacctgacctacgcccgctg
acaggactggatgctccgatcaaatctttcttggaaggtcatagcgaagtgatggaactc
aaacagcagatccaaaaattcttcgaatactggcttcccatgcttgagaaaaataatcgt
agctacctgaccatcgccattggttgtaccggaggcaagcaccgttcggtctacctgacg
cagcagttgggtgaatatttcgcgcaacttggtcatcaagtacagatccgccatacttca
ttggaaaaacagcaatcctag
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