KEGG   Vibrio cholerae O1 M66-2: VCM66_2567
Entry
VCM66_2567        CDS       T00891                                 
Symbol
aphA
Name
(GenBank) conserved hypothetical protein
  KO
K10917  PadR family transcriptional regulator, regulatory protein AphA
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm02024  Quorum sensing
vcm05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VCM66_2567 (aphA)
   05111 Biofilm formation - Vibrio cholerae
    VCM66_2567 (aphA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcm03000]
    VCM66_2567 (aphA)
Transcription factors [BR:vcm03000]
 Prokaryotic type
  Helix-turn-helix
   PadR family
    VCM66_2567 (aphA)
SSDB
Motif
Pfam: Vir_act_alpha_C PadR HTH_34
Other DBs
NCBI-ProteinID: ACP06863
UniProt: C3LRV8
LinkDB
Position
I:2758625..2759164
AA seq 179 aa
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa

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