Vibrio cholerae O1 M66-2: VCM66_2567
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Entry
VCM66_2567 CDS
T00891
Symbol
aphA
Name
(GenBank) conserved hypothetical protein
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02024
Quorum sensing
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCM66_2567 (aphA)
05111 Biofilm formation - Vibrio cholerae
VCM66_2567 (aphA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcm03000
]
VCM66_2567 (aphA)
Transcription factors [BR:
vcm03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VCM66_2567 (aphA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ACP06863
UniProt:
C3LRV8
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All DBs
Position
I:2758625..2759164
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AA seq
179 aa
AA seq
DB search
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa
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