Vibrio cholerae O1 M66-2: VCM66_2584
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Entry
VCM66_2584 CDS
T00891
Symbol
groEL-1
Name
(GenBank) chaperonin, 60 Kd subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VCM66_2584 (groEL-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_2584 (groEL-1)
03110 Chaperones and folding catalysts [BR:
vcm03110
]
VCM66_2584 (groEL-1)
03029 Mitochondrial biogenesis [BR:
vcm03029
]
VCM66_2584 (groEL-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcm04147
]
VCM66_2584 (groEL-1)
Enzymes [BR:
vcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VCM66_2584 (groEL-1)
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VCM66_2584 (groEL-1)
Chaperones and folding catalysts [BR:
vcm03110
]
Heat shock proteins
HSP60 / Chaperonin
VCM66_2584 (groEL-1)
Mitochondrial biogenesis [BR:
vcm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VCM66_2584 (groEL-1)
Exosome [BR:
vcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VCM66_2584 (groEL-1)
Exosomal proteins of other body fluids (saliva and urine)
VCM66_2584 (groEL-1)
Exosomal proteins of breast cancer cells
VCM66_2584 (groEL-1)
Exosomal proteins of colorectal cancer cells
VCM66_2584 (groEL-1)
Exosomal proteins of bladder cancer cells
VCM66_2584 (groEL-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACP06880
UniProt:
C3LS93
LinkDB
All DBs
Position
I:complement(2769744..2771378)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV
ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA
ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtacgttttggtaatgacgctcgtgtaaaaatgctagaaggcgta
aacattctggccgatgcggtaaaagtgaccttaggtcctaaaggccgtaacgtagttctc
gacaaatctttcggtgcaccaaccattaccaaagatggtgtatcagttgcgcgtgaaatt
gaactggaagacaaattccagaacatgggcgcacaaatggtcaaagaagtcgcttctcaa
gccaacgacgcggcgggtgacggtacaaccacagccaccgtactggctcaagcgattgtg
aacgaaggcctaaaagcggtcgcggcgggcatgaacccaatggatctgaagcgcgggatc
gataaagcggttatcgctgcggtagaagagttgaaagcactgtctgtaccttgtgccgat
actaaagcgattgcccaagtaggtaccatctctgctaactcagactctagcgtgggcaac
atcattgctgaagcgatggaaaaagtgggtcgcgatggcgtgatcaccgttgaagaaggc
caagcgctgcaagacgagctggatgtggttgaaggtatgcagtttgaccgtggctacctg
tcaccgtacttcatcaacaaccaagaatcaggcagtgtagaactggataacccattcatc
ctgctggtggataagaaaatctctaacatccgcgaactgctgccagtactggaaggcgta
gcgaaagcctctcgtccactgctgatcgtggctgaagatgtggaaggcgaagcgctggcg
actctggttgtcaacaacatgcgcggcatcgtgaaagtggcagcggttaaagctcctggc
tttggcgatcgtcgtaaagcgatgctgcaagatatcgcgatcttgactggcggtgttgtg
atctctgaagagatcggtctggagctggaaaaagcgactctggaagacctaggccaagcg
aaacgcgtttctatcaccaaagaaaactcaaccatcatcgatggtgctggcgatcaagcc
gcgatccaaggtcgtgttgcgcagatccgtcaacaaatcgaagaagccacttctgactac
gacaaagagaaactgcaagagcgcgtagcaaaactggctggcggcgttgcagtaatcaaa
gtgggcgcagcaaccgaagtggaaatgaaagagaagaaagatcgcgtagaagacgcgctg
cacgcgactcgcgcagcggtagaagaaggcgttgttgcgggtggtggtgtagccctgatc
cgcgcagcttctaaactctcttctctggtgggtgacaacgaagagcaaaacgtgggtatc
cgtgtcgcactacgtgcgatggaagcgccactgcgtcaaatcgtgaaaaacgcgggtgac
gaagaatcagtggttgccaacaatgtgcgtgcaggcgaaggtaactacggttacaacgcg
gcaacgggcgtgtacggtgacatgatcgaaatgggtattttggatccaaccaaagtaacc
cgttctgctctgcaattcgcagcgtctgttgcgggtctgatgatcaccactgaagcgatg
atcactgagctgccgaagaaagatgcaccagcaatgccagacatgggcatgggtggcatg
ggcggcatgatgtaa
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