KEGG   Vibrio cholerae O1 M66-2: VCM66_2653
Entry
VCM66_2653        CDS       T00891                                 
Symbol
gspD
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm03070  Bacterial secretion system
vcm05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VCM66_2653 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VCM66_2653 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcm02044]
    VCM66_2653 (gspD)
Secretion system [BR:vcm02044]
 Type II secretion system
  General secretion pathway protein
   VCM66_2653 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ACP06947
UniProt: C3LSG0
LinkDB
Position
I:complement(2842300..2844324)
AA seq 674 aa
MKYWLKKSSWLLAGSLLSTPLAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
VDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERAN
GDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
RRVDQAGDKEIEVVELNNASAAEMVRIVEALNKTTDAQNTPEFLKPKFVADERTNSILIS
GDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQPT
TSKRNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEGDGIN
LGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVYDTNNNFLRNETTTTKGD
YTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIVGEEV
PVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNVLGANGAVDV
RFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQVEKKN
LMVFIKPTIIRDGVTADGITQRKYNYIRAEQLFRAEKGLRLLDDASVPVLPKFGDDRRHS
PEIQAFIEQMEAKQ
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaaatattggctgaaaaaaagttcatggctgttggcgggcagtttgctgtctacccct
ctagcgatggcaaacgagtttagcgccagctttaaaggcaccgacattcaagaatttatc
aatattgtgggacgcaatcttgagaaaaccatcattgtcgacccttcggtacgcggcaaa
gtcgatgtgcgcagttttgataccttaaacgaagagcaatattacagtttcttcctcagt
gtgctcgaagtgtacggtttcgccgtcgttgaaatggataatggcgtactgaaagtcatc
aaatcgaaagatgcaaagacctcagccattccggtgttgagtggtgaagagcgcgccaat
ggcgatgaagtcattacccaagtggtcgcggtgaaaaacgtttccgtacgcgagttgtcc
cctttgctgcgccaactgattgataacgcaggggcggggaacgtagtgcactacgatccg
gcgaacatcattttgatcacggggcgagctgcggtagtgaaccgtttagcggaaattatt
cgtcgcgttgaccaagccggtgacaaagagattgaagtggttgagcttaataatgcatcg
gcagctgaaatggtgcggattgttgaagcgctcaacaaaacgacagacgcgcaaaacacc
cctgaattcttaaagcccaagtttgtggcagacgagcgtaccaactcgattttgatttct
ggcgatcctaaagtgcgcgagcgcctcaagcgtctgatcaagcagttggatgttgagatg
gcggccaaaggcaataaccgcgtggtgtatttgaaatacgccaaagctgaagatctggtc
gaagtactgaaaggggtgtctgagaacctgcaagcggaaaaaggcaccggacagccgacc
acttcaaaacgtaatgaagtgatgattgccgcgcacgctgacaccaactcgttagtgctt
actgcgccgcaagacattatgaatgcgatgctggaagtgattggacagctagatattcgc
cgtgcgcaagtgttgattgaagcgctgattgtcgaaatggcagagggcgatgggatcaac
cttggtgtgcagtggggctcgctggaaagtggttcagttatccaatatggcaacactggc
gcgtcgattggcaatgtgatgattggtcttgaagaagccaaagacacaacccaaaccaaa
gcggtttatgatactaataacaacttcttgagaaatgaaacgacgaccaccaaaggggat
tacaccaagttagcctctgcattgtcgagcattcaaggtgctgcagtcagcatcgcgatg
ggcgactggacggccttaatcaacgcggtctctaatgattccagctcgaatatcctgtca
tcacccagcattacggtgatggataacggtgaagcctcctttatcgtgggtgaagaagtg
ccggttatcacaggttctactgcaggctctaataacgacaacccattccaaaccgtggat
cgtaaagaagtcggtatcaagcttaaagtggtgccgcagatcaacgaaggtaactcagtc
cagctcaatattgagcaagaagtctcgaacgtgttgggcgccaatggagcggtagacgtg
cgttttgcgaagcgtcagctcaacacttctgtgatggtgcaagatgggcagatgttggtg
ctcggcggtttgattgatgagcgagctcttgagagtgagtcgaaagtcccgctcttgggg
gatattcctctgctgggtcaactgttccgctcaaccagctcgcaagtggaaaagaaaaac
ctgatggtgtttatcaagccgaccattattcgtgatggcgtgacggccgatggcatcacc
caacgtaaatacaactacatccgcgccgagcaactgttccgcgccgaaaaaggtttacgt
ctgctggatgatgctagcgtgcctgtgttgccgaaatttggcgatgaccgccgccattca
cctgaaattcaagcctttattgagcagatggaagccaagcaatga

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