Vibrio cholerae O1 M66-2: VCM66_A0178
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Entry
VCM66_A0178 CDS
T00891
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
vcm
Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcm03000
]
VCM66_A0178
Transcription factors [BR:
vcm03000
]
Prokaryotic type
Helix-turn-helix
Other families
VCM66_A0178
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
Mg_chelatase
AAA
HTH_8
AAA_2
AAA_16
AAA_22
GAF_3
MCM
Motif
Other DBs
NCBI-ProteinID:
ACP07159
UniProt:
C3LUK4
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Position
II:complement(200266..201858)
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AA seq
530 aa
AA seq
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MQEFSLSTLLEMTVGLASGANNEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGL
TRDTLGRRFVVSEHPRLAQICSADLPVRFAADCPLPDPFDGLLLDSEDDLPMHSCMGLPL
HFGEQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLE
ELNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSN
RKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPL
SAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPI
YVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINR
AALKAKARQRGRPVTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQ
RHLISETLTQADFNWAEAARRLQTDRANLTRLAKRLGITVSRSHSIERSR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaattctccttgagtactttgttagaaatgactgtcgggctcgccagcggagcc
aacaacgaagagcgttttcatcgcctattggatgcggtacgcaaagcggtgatctgtgac
tgcgtcgttctgatgtctctgcacaacgacaccttaactcctctggcgatgcagggatta
actcgcgacaccctaggccgccgtttcgtagtcagtgaacatcctagattggctcaaatt
tgcagcgcggatttacccgtccgttttgcggcggattgcccactccccgacccttttgat
gggctgctactcgacagcgaagacgatctgcctatgcactcatgtatgggcttacccctc
cattttggcgagcaattactgggtatattgacgctcgatagcttaaagcccgatgcgttt
gatcatctctcacctcgtagtttagaaatacttgcggccattgcggcagcaacgttgaaa
atgacgctcaccttttctgagctggaaaaccaagccaaacagacacaattacgcctggaa
gagctcaaccaagaagcatggagccgtgacagtgtcgaaattattggtaatagcggcccc
atgctcgccatgaaagcggatattgatgtggttgcgccctcgcaattcaatattctgatc
cacggtgaaaccggtgtaggtaaggagctggttgctcgcaccatacaccagcgttcaaat
cgcaaacggcagcctctggtgtatgtcaactgcgccgctatccctgaaaacctgttggaa
agcgaactgtttggccatgttaaaggggcgtttaccggagctgaccgcgcgcgaatgggt
aagtttgctctggcggatggcggcacactgtttctcgatgagataggtgaattacccctt
agtgcgcaaagcaaaattctgcgcgcactgcaaaaccatgaaattcaacctgttggccaa
gatcgagtacaaaccgtcgatgtgcggattctagcggccaccaaccgtgatttgaaaaaa
gaggtcgaagctggccgttttcgagccgatctctatcacagattgagcgtgtatccgatc
tacgtgccgccactgcgtgaacgcaaaggcgatctctccctactcgcgggatacttcgta
gaacaagcgcgacgtaaactcggtatcactcaactaaagctgcatggcgatgtgttaagt
cagcttatccaatacccttggccggggaatgtgcgagagctagagcatgtgattaaccgc
gcggcactcaaagccaaagcacgccagcgggggcgcccagtcacgacattaaaagttgaa
gacttaggggaattacaagggccaagagcagcgatggttgaaccgacagcgcaagatgaa
cctatgctgggtgaatggattggtgagttgggtttacgtgacgcgacggatgaatttcaa
cgccatttgatcagcgaaaccctcacccaagctgactttaattgggcagaggcggcacgc
cgcctccagaccgacagagccaacctgacacggctggccaaacggctcggcattactgta
tcccgcagccactcaatagaaaggtctcgttaa
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