Vibrio cholerae O1 M66-2: VCM66_A0779
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Entry
VCM66_A0779 CDS
T00891
Symbol
groEL-2
Name
(GenBank) chaperonin, 60 Kd subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VCM66_A0779 (groEL-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_A0779 (groEL-2)
03110 Chaperones and folding catalysts [BR:
vcm03110
]
VCM66_A0779 (groEL-2)
03029 Mitochondrial biogenesis [BR:
vcm03029
]
VCM66_A0779 (groEL-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcm04147
]
VCM66_A0779 (groEL-2)
Enzymes [BR:
vcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VCM66_A0779 (groEL-2)
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VCM66_A0779 (groEL-2)
Chaperones and folding catalysts [BR:
vcm03110
]
Heat shock proteins
HSP60 / Chaperonin
VCM66_A0779 (groEL-2)
Mitochondrial biogenesis [BR:
vcm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VCM66_A0779 (groEL-2)
Exosome [BR:
vcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VCM66_A0779 (groEL-2)
Exosomal proteins of other body fluids (saliva and urine)
VCM66_A0779 (groEL-2)
Exosomal proteins of breast cancer cells
VCM66_A0779 (groEL-2)
Exosomal proteins of colorectal cancer cells
VCM66_A0779 (groEL-2)
Exosomal proteins of bladder cancer cells
VCM66_A0779 (groEL-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
ACP07739
UniProt:
C3LW84
LinkDB
All DBs
Position
II:740124..741716
Genome browser
AA seq
530 aa
AA seq
DB search
MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI
ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI
DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG
QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV
AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV
ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY
DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA
ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacacgttctgttttcaaccgacgccagacagaaaatgcttagtggcgta
aatttactggccaacgccgtcaaagttacgctcgggcccaaaggtcgccatgttgtgctc
aataaatcttatggtgcgccaaccatcactaaagatggcgtctctgtcgccaaagagatt
gagctcgccgataaattcgaaaacatgggcgcacaaatgctcaaacaagtggcgtccaaa
gccaacgacgaagcgggcgatggcactaccacagcaaccgtgttggcccaagcgctgatc
aatgaagggatgaaggcggtcgccgctggcatgaaccccatggatcttaagcgcggtatc
gacaaagcagtctccgcagcggtcgagaaattgcaccaactggccaaaccttgcagtgac
acccaatcgatcactcaagtcggtgccatttccgctaatagcgatcacgcgatcggtgaa
atcatcgcgcaagcgatggagaaagttggccgcaatggtgtgatcacggttgaagaggga
caagctctacaaaacgagctttcggtggttgaaggtatgcaatttgatcgcggttacctt
tccccttacttcatcaaccaacccaaagcgggctgtgttgagttggagaatccctacgtc
ttgctagtagacaagaaaatcagccacattcgtgaactgctaccgattttagaatccgtg
gctaaagcttcccgttcgctgctgatcattgctgaagatgtggatggcgatgcgcttgcg
acattagtggttaacagcatgcgtggcatcattaaagtggcagcggtgaaagcgccaggc
tttggtgaacagcgcaaagcaatgctcgaggacatcgcggccctcactgctggccgagtg
attagcgaggaaataggtcttgagcttgaaaaagtgacgctggacgatctgggtagcgcg
aaaaaagtcaccatcaataaagacaataccacgattgtcgatggcgctgccgagccaagt
gccctccaagatcgcatcgcgcagatccaacatcaattggaacacaccacatcgcaatac
gatcgggacaaattgcagcaacgcattgccaaactctctggtggggttgctgtgatcaag
attggtgcggcaacagaagtggagatgaaagagaaaaaagatcgcgtggatgatgcattg
cacgccactcgcgccgcagtggaagaagggattgtggccggcggtggtgtcgctctgctg
aaaattgccaacgagctcagcaatttacaaggtgataatgacgatcaaaatgtcggcatt
cgcattgcgctaagagcgatggaagaaccactgcgtcaaatcgccatcaacgcaggggat
gaagcttcagtgatcgcaaatcaagtcaaaacgggcgatgagcattacggctacaacgct
gccaccggccaatttggcaatatgttagagatgggcattttggatcctgcgaaggtgaca
cgctcagcgctacagtttgccgcaagcattgctggcttgatgatcaccaccgaagccatg
gtcagcgaagtagacaaagagtctgcggcgtaa
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