Volvox carteri f. nagariensis: VOLCADRAFT_101916
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Entry
VOLCADRAFT_101916 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K16474
intraflagellar transport protein 88
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_101916
Cilium and associated proteins [BR:
vcn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
VOLCADRAFT_101916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_12
TPR_1
TPR_14
TPR_6
TPR_16
TPR_17
TPR_8
TPR_7
TPR_11
TPR_10
TPR_9
ANAPC3
TPR_21
Foie-gras_1
DUF4810
DUF6340
TPR_15
Motif
Other DBs
NCBI-GeneID:
9616702
NCBI-ProteinID:
XP_002950286
JGI:
101916
UniProt:
D8TVP1
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MSYATAEDDDLYGGYDEQSNPLAGSGGAAFKALGSDAPPPGTAMMGPPGTAMKSFVPGTA
MRGGTAMQDPSMARPMTSNRGAGFTSAPNKKFDPLNRSMGTTLGSTGGATILATRKGDVT
PEEQARNLEKTVHELLEKSAADCVKGDMNSALEHAMEAKKNERKLCRFRQQQNMAEQINP
ELMYAIDFNLAHMYHMNRNYSEALNLYQAIVRNKDYPQSGWLRVNMGNIYLEQKKYPTAI
KMYRMALDQIAATAKEVRFKIMRNIGIAFVKLGQYPDALQSFATVMDNVPDHQTGYNLVM
CNYALSDREGMKTAFQKLLKVSPPQEMDDDDDDVLNDEDEMQAVVADDGLKEELRKRNSA
ITRLIVKAAQLISEKVDRANGFEGGFQWCCEQLREAGYTKLANEVELAKATRFMGQKQFD
KAVSVFKEFEKKEPRVKARAATNLAFLYFLEGETDQADKYSEMALKSDRYNARAYVNKGC
VLVERGDLEGARSLFNEGAGIDPYCVEAIFNLGLVSQRLNELTYALAAFKKLYNMVPDNV
EVIHQIATTYDMMGDFKNAVKWFEMLTSLVPNDPGVLARLGAIHARFDDEAKALHYYQEA
HRVYPVNMDVISWLGAYHVKSEVYEKAMPFFDLASKIQPQEVKWALMVASCYRRTNNLPG
ALAKYKQIHAAHPENVECLRYLVHLCSELGRRAEAAEYMTKLKKAEKAAMPDAATMAAAA
APVAASASPMGMDDDLGTSAVSAQNRGKKMLVKEHLGGKEADDWGNEQLGDDLLPM
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgcaaccgcggaggacgatgatttatatggaggatatgatgaacagtcaaat
ccccttgcgggctccggaggcgctgcttttaaagcgcttggttcagatgctccgccacct
gggacagccatgatgggtccacccggcacagccatgaagagcttcgtgccgggcacggcc
atgcgtggaggcacagcgatgcaggaccccagcatggcgcgccctatgacatccaacagg
ggcgcagggttcacgtctgcacccaacaagaagttcgaccccctgaacagatcaatgggg
acaacgttggggtctacgggaggagccacaattttggcgacgcgcaagggtgatgtgacg
ccggaggagcaggccaggaatcttgaaaagacggtgcatgagttattggagaaaagtgcg
gcggactgcgtcaaaggagacatgaactcggccctggaacacgcaatggaagccaagaag
aacgagcgcaagctctgccgctttcgtcagcagcagaacatggctgagcagattaacccg
gaactcatgtacgctatcgacttcaacctggcgcacatgtaccacatgaaccgaaattac
agcgaggccctgaacctgtatcaagctatcgtgcgcaacaaggactatcctcagtctggc
tggctccgagtcaatatgggcaacatttacttggagcagaagaagtaccccacagccatc
aagatgtaccgtatggctctggaccagattgcagctaccgccaaggaggtgcggttcaag
atcatgcggaacattggcattgcctttgtgaagctgggccagtatcctgacgcgctgcag
tccttcgccaccgtcatggacaacgtacctgaccaccagaccggctacaacttggtcatg
tgcaattatgcgcttagcgaccgggagggtatgaagaccgccttccagaagcttctcaag
gtgagcccaccccaggagatggacgacgacgatgacgacgtgctcaatgacgaagacgag
atgcaggcggtggtggcggacgacgggctgaaggaggagctgcggaagcggaacagcgcc
atcacgaggctcatcgtgaaggccgctcagctgatcagtgagaaggtggatcgagccaac
ggcttcgagggcggcttccagtggtgctgcgagcagctgcgggaagcgggttacaccaag
ttggccaacgaggtggagctggccaaagccacgcgcttcatgggccaaaagcaatttgac
aaggccgtctccgtcttcaaggagtttgagaagaaggagccgcgtgttaaggctcgcgcc
gccacaaacctggctttcctgtacttcctggagggtgaaacggaccaggcggacaagtac
tctgagatggcacttaagagcgacaggtataacgcccgtgcgtacgtgaacaagggctgc
gtgctggtcgagcgcggggacctagaaggagcgcgttcgttgttcaatgagggggcaggt
atcgacccctactgcgtggaagccatcttcaacctgggcttggtgtcacaacgtctcaat
gagctgacgtacgcgttggcggcatttaaaaagttgtacaacatggtgcccgacaacgtg
gaggtcatccaccaaattgccaccacatacgacatgatgggcgacttcaagaacgctgtc
aagtggtttgaaatgttgacaagcctagtgcccaacgatcccggggtactggctcgattg
ggcgccatccacgcgcgattcgatgacgaggcaaaggcgttgcactactaccaggaggcc
caccgtgtctacccggtcaacatggacgtcatctcgtggctgggggcctaccatgtcaag
agcgaggtgtacgagaaggcgatgcccttctttgacctggcttccaaaattcaaccgcag
gaggtcaagtgggccctgatggtggcctcgtgttaccgccgcaccaacaacctgccgggg
gcattggccaagtacaagcagatccatgccgcgcacccagagaacgtcgagtgtctgcgc
tacctggtgcatctgtgcagcgagttgggtcgtcgtgcagaggcggcggagtacatgacc
aagctcaaaaaagcagaaaaggctgcgatgccggacgccgcaacgatggcagcagctgcg
gcacccgtcgctgcatctgctagccccatgggcatggacgacgacctcggcacgtccgca
gtctcggcgcagaatcgcggcaagaagatgctggtcaaggagcatttgggagggaaagaa
gccgacgactggggaaacgagcagcttggggacgacctcctgcctatgtga
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