Volvox carteri f. nagariensis: VOLCADRAFT_102618
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Entry
VOLCADRAFT_102618 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K25451
dynein regulatory complex subunit 7
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_102618
Cilium and associated proteins [BR:
vcn03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
VOLCADRAFT_102618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
MORN_DRC7
Beta-prop_FBX42
DRC7_C
Beta-prop_ATRN-LZTR1
Kelch_HCF
LRR_8
CEPT76_peptidase
LRR_14
Kelch_1
LRR_4
Kelch_2
LRR_LRWD1
Beta-prop_TYW4
LRR_9
NANM
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
9625465
NCBI-ProteinID:
XP_002945646
JGI:
102618
UniProt:
D8TH34
LinkDB
All DBs
Position
Unknown
AA seq
1637 aa
AA seq
DB search
MAEGIGTLSREVLEERLMEARRTYRLNMGYAGLKQLPPGFVDLVKKYNPHITELELSSHN
PCPKINTRSNDITDLPDELEEFRYLRILRLKYNQLKRIPAVVYRLQQLMVFDVSGNKISK
VDEAIGHLTLLKELDVSGNEITTLPDSLATLPKLEVIQVENNRLELLPDNLGELAAVIKM
DLSTNNLRYLPNSLGQLKKVQRIDVGNNLLTKVPPSMGHLKTLKEFNLRYNNLDDRYKAK
VEEGLSKFLAFLREEEERERLEEIERLKPIGTPVGSYLEYRCKAEVGQLVKTEMGDTTVD
NRCWIRTGHTLTQARMYVGSMLLIFGGQLQKDGSTTNDLFWMTMDRMEWHNQPCKGEKPT
ARYNHAACYDEENNRLVIFGGRTAERKRLNDVAFLDLDSWTWYKPSTEGAAPSPREQAVA
TFWAGNMVLFGGHAIGGRTNDLFLLDLGAWQWSQPAFSGTAPSPRQACALCIGHGNLLFV
HGGRNNFVLEDLHVMDFVTKTWTEIPCEGRCPPPRHSHHIHVHKDNLYLFGGLDELGAQS
NAMFRVHLPGDQQETYATAKPKWVEWDSELPYNKNRTATLSNGTISIYQLGSNTLGRVND
DDAEKGLVFWDVFKTAKLEGLKPRQLAEDELRPKNAKRMRVQHTINTAGKMPRSFTQHTA
HEVRVLQYVQDFQRIFEELYPYRRPLYLTPRNECGVPKFVCTTIRASQLVYTELYDLDGA
AQFVADFLSYEPLEDPLHPPDTLPSPMSVLDWRAGDSFDLAVVLASLLIGVGFNAYVVMG
YAPYAVVQNDQRNTVCTVLEREAQGAAAAAAAAAGAAAKGYDAAAGGRSGGHGGGGTHRR
AGEGSTTNPALPVGALAGAAVEVRAPRYVVKPLASLKSKVLKGGRIETPDSPAAATAAAD
RARLSTPGDGGGNPDDEAVGDPTAAAAADPPATADGGGGDPLAEDHDAGVCKYVHAWVMV
LPGKRDVSEAMFIEPSTGRKYPLQDSPYKGIEMLWNHRNFWVCLQQPQPHSDSRADPKDI
SYDLNDPSKWEPVFEERGMRSRSEGATEESEVLRAEGGTSRIHRNDSTRNVNTGGMALGK
GGGKGGGSTRLQGVGGMSMAQRVAQRKQLATPGGGGGAGGAGAADTPPRTAEGHGDGLAG
LGEDGDGGEADVVPDIPPSWVLKLTIPRDAFDMRCPRGVKLTLYRRCQHEIFARFGDCSR
WDGMVEKLTLYADDERTTVTEIRETFTRRRDKLRERRVYPQKDTTIELFDRGSAFALKDI
LTVKNDRRVFNFYAAARLDGLEKREELENRKIIEHFLGRDDRLVYRSATYTEDAATAAAA
AAAAGGGGAPGAPPGSSGAEAAGAAEGDPEEDAARRTRKTRNRGGDKRMLPIRKMTEKFA
RNPALSADVDVAKRVYYLTEGRMRVEYHFGTNRITNSSRSFTKDGQSQIVQVDPLAPRPQ
PAALLEEYSALLVAEKDCLQSVRDSEWEISEITRTRTNQEQNITLETPYYDIVRIKAEES
EEEEEEAAEAAYDYLSPFLPTLLGTQQLTRTQALEVREKALKALKDRLIERANIIQARLD
EETAALAKRQQTFHRDRDQMTAAEEEEYERQTEESMFRIHILERRLRRHEEQALHKYYEL
DAKLRGDPRLQALLNVY
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcatcgggacgctgtctcgcgaagtcctggaggagaggttgatggaggct
cgtcggacctaccgacttaatatgggatatgctgggctcaagcaactgcctcctgggttt
gtggatctggtgaagaaatacaatccacacatcactgagctggagctttccagccataac
ccctgccccaaaatcaatacacgcagcaatgacatcaccgacctaccggacgagctggag
gagttccgctatctgcgcatcctccgcctcaaatacaaccagctcaagcgcattccggcc
gtcgtctacagattacagcagctcatggtgttcgacgtcagcggtaacaagatctccaaa
gtggatgaagcgatcggacatctgacgttgctaaaggagctggatgtttccggaaatgag
atcacgactctgccggactccttggctaccctgcccaagctggaggtcatccaagtggag
aacaaccgcttggagctgcttcccgacaacctaggtgagctggcggccgttatcaagatg
gacctgtccaccaacaacctgcgctacctgcccaacagtttggggcagctcaagaaggtt
cagcgaatagacgtggggaacaacttgctaacaaaggttccccccagcatggggcacctg
aagacgctcaaggagttcaacctgcggtacaacaacctggacgaccgatacaaggccaaa
gtggaggagggcctgtctaagttcctagctttccttcgtgaggaggaggaacgcgagcga
ctggaggagatcgagcggctgaagcccattgggacccccgtgggctcctacctggagtac
cgctgcaaggcggaggtgggtcagctggtcaagactgagatgggcgacaccaccgtggac
aacaggtgctggatacgcaccggacacacactgacacaggcgcgtatgtatgtgggcagc
atgttgctcatcttcggcggtcagctccagaaggacggctccacaaccaacgacctgttc
tggatgactatggaccgaatggagtggcacaaccagccgtgcaagggggagaagcccacg
gcgaggtacaaccatgccgcctgttacgatgaggagaacaatcggttggtcatctttggc
ggtcgtaccgcggagcggaagcggctcaacgacgtcgccttcctggacctggactcctgg
acctggtacaagccgtccacggagggtgcggcgccgtcgccgcgggagcaggcggtagcc
accttctgggccgggaatatggtgctgttcggcggtcatgccatcggcggccgcaccaac
gacctgtttcttctggaccttggcgcctggcagtggtcccagcccgccttctccggcacc
gcgccctcaccccgtcaggcctgtgcgctgtgtatcggccacggcaacctgctgtttgtg
catggaggccggaacaactttgtgctcgaggacttgcacgtcatggactttgtgaccaag
acctggacggagatcccttgcgaggggcgctgcccccctccccgccatagccaccacatc
cacgtccacaaagacaacctctacctcttcggcggcttggacgagctgggggcccagtcc
aacgccatgtttcgagtgcacctgccgggagaccagcaggagacgtacgcaaccgcaaaa
ccaaagtgggtcgagtgggatagtgagctgccgtacaataagaaccgtacggcaacgctg
agtaacggcaccatctctatttaccagcttggcagcaacacgctgggccgtgtgaatgac
gacgacgcggagaagggcctggtgttctgggacgtgttcaagacggccaagttggagggc
ctgaagcccaggcagctggctgaggacgagctgcggcccaagaacgccaagcgcatgcgg
gtccagcacaccatcaacaccgccggcaagatgccacggagcttcacacagcacacggct
cacgaggtccgggtgctgcagtacgtgcaggacttccagcgcatttttgaggaactgtat
ccgtaccgccggcccttgtacctcaccccccgcaacgagtgcggcgtccccaagtttgtt
tgtacgacaatacgggccagtcagctggtttacacggagctgtacgacctggacggcgcg
gcgcagttcgttgcagattttttgtcgtacgagccgctggaggacccactgcacccgccc
gacacgctcccctcacctatgtccgtccttgactggcgagccggtgactcattcgacttg
gctgtcgtactcgcgtcgctgcttatcggtgtgggtttcaacgcctacgtcgtcatgggc
tacgcaccgtacgctgtcgtacagaacgatcagcgaaacacggtctgtacggtgctggaa
cgggaggctcagggcgcggcggcggcggcggcggcagccgccggggcggcggccaagggt
tacgatgcggcggctggcggccgctccggtggccacggcggcggcggcacgcaccggcgc
gccggcgagggctccaccaccaaccccgccctgcctgtgggcgctctggccggggccgct
gtggaagtccgagcacctcgctacgtcgtcaagccactggcctccctcaagagcaaagtc
ctcaagggtggcaggatcgagacgcccgactcccccgccgccgccaccgccgccgctgac
cgcgcacgtctctcgacacccggtgacggcggcggcaaccccgacgacgaggccgtcggc
gacccgacggccgcggcagccgccgacccgcccgctactgccgacggcggcggcggcgac
ccactcgccgaggaccacgacgcaggtgtctgcaagtacgtccacgcgtgggtgatggtg
ctgcccggcaagcgcgacgtgtcggaggcgatgttcatcgagccgtcaacaggtcgcaag
tacccgctgcaggacagtccgtacaagggcatcgagatgctctggaatcatcgcaacttt
tgggtgtgtttgcaacagccgcagccgcacagcgactcccgtgccgaccccaaggacatc
tcctacgacctgaacgacccgtccaagtgggagcccgtgtttgaggagcgcggcatgagg
agccgcagtgagggcgccacggaggagtccgaggtcctccgtgccgaggggggtaccagt
cgcatacaccgcaacgactccacacgtaacgtcaacaccggcggcatggcactcggcaag
ggcggcggcaagggcggcggctccacacgacttcaaggagtgggcgggatgagtatggcg
cagagagtggcgcagcgaaaacagctggcgacgccaggcggcggcggcggtgctggcggc
gccggggccgcggatacgccgccgcgtacggctgagggtcacggtgacgggctcgccggg
ttgggtgaggacggcgatggcggcgaggcggatgtggtgccggacatcccgcccagctgg
gtgctgaagctgaccattcccagggacgctttcgacatgcgctgtcctaggggcgtcaag
ctaactctgtatcggcgatgccagcacgaaatctttgctcgcttcggcgactgcagccgc
tgggacggcatggtggagaagctgacgctgtacgcggacgacgagcgaaccaccgtaacg
gagatccgggagaccttcacacgccggcgcgacaagctgagagaacgccgggtctaccca
caaaaggacactaccattgagctgtttgatcgcggaagtgcctttgccctcaaggacatc
ctcaccgtcaagaacgaccgtcgcgtgttcaacttttatgccgcggcgcggctggatggc
ctggaaaagcgggaggagctcgagaaccgcaagatcatagagcactttttggggcgcgac
gatcgcctggtgtaccgcagcgccacctacactgaggacgccgccaccgccgccgccgca
gcagcagcagcgggtgggggaggcgcccctggagcacctccggggagcagtggtgctgag
gcagcgggagccgcagagggcgacccggaggaggacgccgcacgccgcacacgcaaaaca
cgcaaccgggggggcgacaagcgcatgctgcccatccgcaagatgacggagaagttcgct
cgcaaccccgctctgtcggcggatgtggatgtcgccaaacgcgtgtactacctgacagag
ggccgcatgagagtggagtaccacttcggaacgaaccgcatcaccaactccagccgctcg
tttacgaaagatggtcagagccaaatcgtgcaggtggatcctctggcgccgcggccacag
ccggcagcgctgctcgaggagtacagcgctcttttggtggcggagaaggactgtcttcag
tcggtacgggatagtgagtgggagatctcggagatcacccgtacccgtacgaaccaggag
cagaatatcactctggaaacgccgtactacgacatcgtacggatcaaggcggaggagagc
gaggaggaggaggaggaagcggcagaggcggcgtacgactacctgtcccccttcctgccg
accttgctgggcacccaacagctcacccgcacccaggcgttggaggttcgggagaaggcg
ctcaaggcgctcaaggaccgcctaatcgagcgagcgaacatcatccaggcccgtttggac
gaggagaccgccgccctggccaagcggcagcagacattccaccgcgaccgcgaccagatg
acggctgcagaggaggaagagtacgagcggcagacggaggagtccatgttccggatccat
atcctggagaggcggctaaggcgccacgaggagcaggcgctgcacaagtactacgaactg
gacgccaagttgagaggcgacccaagactgcaggcgctgttgaacgtctactga
DBGET
integrated database retrieval system