KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_102621
Entry
VOLCADRAFT_102621 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    VOLCADRAFT_102621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_102621
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    VOLCADRAFT_102621
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_N
Other DBs
NCBI-GeneID: 9625325
NCBI-ProteinID: XP_002945651
JGI: 102621
UniProt: D8TH41
LinkDB
Position
Unknown
AA seq 361 aa
MFGAFPGLPGFPGQTFEAMYRAMPVAFIDKQSAEHGDKIIMPPSALERLASLHIEYPMLF
KVEGLQSKRHTHCGVLEFIAEEGVVYMPHWMMQNLLLQVGDTIRVRSASLPKGTYVKLQP
VTSDFLDITNPKAVLERTLRSYSCLTVGDCFVVNYNNKNYEIEVKDAKPGPAISVIETDC
QVDFEAPKDYKEPERVPPKAPEPAPSAAPVAADGKAGGTATGPAPAPEPEEPKFLAFAGT
GRRLDGKAAGPTNPVPVPLRMPSNTTLSAGTSPKTGSGPSGSGAGPSGSAAPSGSGGVQK
AGTFVNFGPTGNRLEAKLAAKQGGGGTAKPPPPPPQPTEEKKDDSSSNFKAFSGKGYSLK
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgttcggggccttcccgggattgcccgggttcccaggtcaaactttcgaagcaatgtat
agagcaatgcctgtggcgtttatcgataaacaatcggctgaacacggcgacaagatcata
atgccgccctcagctttggaacggctagcttcgctgcatattgagtacccgatgctgttt
aaggtggagggcctgcagtccaagcgacatacgcattgcggtgttttggagttcatcgcc
gaggagggtgttgtttacatgccgcactggatgatgcaaaaccttttgttacaagtaggg
gatacgattcgcgtgcgcagcgcttccctaccaaagggcacatacgtgaagttgcagccc
gtgacgtcggacttcctagacatcaccaatccaaaggcagtcttggagcggaccttgaga
agctacagctgcctcacagtgggcgactgttttgtagtaaactacaacaacaaaaactat
gagatagaggtgaaggacgcaaaacctgggccggcgatctctgtcattgaaacagactgt
caagtggactttgaggcaccgaaggattacaaggagcctgagcgcgtccccccgaaggct
ccggaaccagccccgtcagcagcgccagtggctgctgatgggaaggccggagggaccgca
acagggccggcgccagctcccgagcccgaagagcccaagttcctggcgtttgctggcact
ggacgacggttagacggcaaggcggcagggcccaccaatcctgtccccgtgccgctgcgc
atgccgtccaacaccaccctcagcgcgggcaccagtccgaaaacggggagtggccccagc
ggctcaggtgccgggccgtcgggatccgctgcgccaagcggcagcggtggcgtgcaaaag
gcggggacgtttgtgaactttgggccaactggcaaccggctggaggcgaagctggcggca
aaacaggggggtggagggacggcgaagcctcctccgccaccgccacaaccaacggaggag
aagaaggatgactccagtagcaacttcaaggcgttttcagggaaaggctacagccttaag
gggtag

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