Volvox carteri f. nagariensis: VOLCADRAFT_103142
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Entry
VOLCADRAFT_103142 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K13176
THO complex subunit 7
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_103142
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_103142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_103142
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_103142
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
VOLCADRAFT_103142
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
VOLCADRAFT_103142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
ThsA_Macro
Exonuc_VII_L
vRNAP_dom
Motif
Other DBs
NCBI-GeneID:
9624635
NCBI-ProteinID:
XP_002946720
JGI:
103142
UniProt:
D8TKU8
LinkDB
All DBs
Position
Unknown
AA seq
205 aa
AA seq
DB search
MAAVKLTPAEEEAIIKQRYLTQMTVPKGNLPLKVLTKKFLQLLEQLDKGPDAEADVARLY
REFLREVAQTELHAKKLRSVCEANTREQNTYNQKQRELEEAIEQTKRDIEEKKLELQRAK
QVLGQNQQYEIMEHPSREVTQAAMDAEMALMAEAKTEGARIAQLMERRRKQFSLLFYVIE
ELQRTTAEEGIAEELAGLDGMDVDG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaagctaacgccagctgaggaggaggccatcatcaagcagcgctacctg
acgcagatgacggtgcctaagggcaacctcccgctcaaggtcctcacaaaaaagttcctg
cagcttctagaacagttggataaaggccccgatgcggaggctgatgtggctcgactgtac
cgggagttccttagagaggtggcacagacggagctacacgctaagaagctccggtctgtt
tgtgaggcgaacacgcgggagcagaacacgtacaaccagaagcagcgcgagctggaggag
gccatcgagcagacaaaacgggacatagaggagaagaagctggagctgcagagagctaag
caagtgctgggacagaaccagcagtatgagatcatggagcacccctccagggaggttacc
caggcggccatggatgcggagatggcgctgatggcggaggccaagacggagggcgcgcgg
atagcgcagctcatggagcggcgccggaagcagttctccctgctgttctacgtcatcgag
gaacttcagcgtacgacagcggaggagggcattgcggaggagctggcggggctagatggc
atggacgtggacgggtga
DBGET
integrated database retrieval system