Volvox carteri f. nagariensis: VOLCADRAFT_103265 Help Entry VOLCADRAFT_103265 CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K12879   THO complex subunit 2 Organism vcn  Volvox carteri f. nagariensis Pathway vcn03013   Nucleocytoplasmic transport vcn03040   Spliceosome Brite KEGG Orthology (KO) [BR:vcn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VOLCADRAFT_103265   09122 Translation    03013 Nucleocytoplasmic transport     VOLCADRAFT_103265  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcn03019]     VOLCADRAFT_103265    03041 Spliceosome [BR:vcn03041]     VOLCADRAFT_103265 Messenger RNA biogenesis [BR:vcn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      VOLCADRAFT_103265 Spliceosome [BR:vcn03041]  Complex C   Other components    EJC/TREX     VOLCADRAFT_103265  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     VOLCADRAFT_103265 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 PAM2 Motif Other DBs NCBI-GeneID:  9620008 NCBI-ProteinID:  XP_002947171 JGI:  103265 UniProt:  D8TKV7 LinkDB All DBs Position Unknown AA seq 2585 aa AA seqDB search MAADIKEQLLGVTLKHIQGRVFEADEFYKALEPLGTPAAYAEALVDVFWITAIPSTCRML WVRFEVGRGPESMNLVAAIKACWQDKRVTEKQLLQVLEPDCLHTVGLIRDKSVWDKKAVR YNTKLNYTILKYNLLREDAEGYAKLVTLYNHFGSGAVGKEDLPYLARELQSLIGSFDLDP NRCLDLLLDAAAAQPHNTALLEAVGLLKGEAVGQLLGFKLEQYQDPSRDPAPRELLLVAA HLVRTGRTSLQELLGHLSPSDEQQATGQRSAREALMRRVGDIGQINLGAASGGDAAAGGD GGDGRDRNGKGGQQPDASGRNVRSTGLSAASFELDPSAAVGPLALGPDPRHNQPLALLDA LLQVGAWDAAVELHDRLVAQGATPAAHPPISEALSRLLAAEVAPAYDSLFPQGVLGRNAL WGDVPPSGATSPQLSPMALRLLNMLGLYIHRDVRLFIKVLRILRYQLAFPLTNDSGPELG AGAAAITSTAGAPQANGQPQQTTAAAVPRSTMGQRPERYGPLDELLAMVLLPALSCCPVH LPLAADVWECVKLLPVQSRYRIYAEYKELSQSQPLLQAAWRLATVETKKVLKRLVLPTDP QKKKEACRPHARMVAKVAHANPLPVMEAIVTQIEVYDNQIEVSLEALKYLSSFSYDMLTF VILSRLAIERDKVKEDGVNISGWLQSLARFTGAACRRFSDLDVGAVLQFLVNTLRGGDSF DLLVLQQIIVAMTGVRLEAVLSDEQLDALAGGPELVAEAVVLDAGEADAALGMGRTASAK DLAKGRQRLLRALEDYDSRRLGVSGGSCSLTLPLLILTAQQRSIIINHTDSKLIKFIATM YDRCQDTLLHLTEFLRLALPVESYADMLPTPDVLRREYGIDVEVVWHIYRPVMARLLDAA APQPAEEGELEEGEEGAAPAAGPADAPPREEPRVGDKTWGGVLAGLPACAGNSALWSVVT PDLYTTFWSLQLQDIYVPVKRYEKELSNVKDQLQLLDNNYMNYIRPGLQSNSGYVSNNLQ QQYEQYKVEKAALQEKQSRLTAELEQRRRHVDEVKQRLVLQRAGFFLPRAPPPQQQQPQH QQAGQQQEEGADASKPAAPAAAGAAATANGPKGAPSGAAGGAMASGANAAGPGGPARPPA RNVPAFYAVAQEMFLPRILFSAMDAVYCARLILLLHHMEVRHFSLIPFLDSTLRATIPVL RSMTEVEANNFGVFLFEMLKQLVAWHRDEKLFNDDCVRKTAALANVKQPHNVFKSKMMLW HGIISSTFRASIESGDYTQIANALSVMGRLVTVWPGTVPSANSFRQWVEKLQKEDPREDI KTMARSYLIALSREAEKPGRMMSQLEYGGPQVVERQRAMASSAAGRGAANSPAAAPKGTT RPVAGPGQPAAAGGSAAAAAPTAGEGGHKSLNVAAKPFVPRGAGPPESAAAPGGGGGGVS TAAGGAADGGDAAAGDAKDGRGLATVRKRPRGEGRADGDKAEAPAVVAEKAEKAAAGADV GSGLKKQRVESGVGAQAGGAAAAAAAAADDTRSNVAGGNKVRGVGGGGGSGGDRDGTDTM SEAGGRAGSETSGRVGADGTSGGREGKSEKEHKEHKRSKDKDRQVRSLQKGIEKERGGNK EKDKDKDKERGKGDREDKDESRREEKERRREEKERERAEKAEEARAAAKAVFPDRDRAAG DSKDNKDGRGERVPGSSTAVEKADRERSDVKGSGGRVGVGPADNGSSKDREVRASSAERS RDRHGNRRIGLPEDAADRERDTADGGGKRRRMDGKSEGGSGGGVGGVGGSPGHGGLSGRL GSITPEVGTAGRRSGADTEIEYDERGGFALPPAPAVQHRMRDGEVAEMQTALQSAQPPAP RGSSSSSGRHTEPAAHGGRSGGVEHTVAGEQRQQQRQQRQQTKLRLAKLSKVQLKYLDYL RQLILLLNQHGVLHPEALGRSGACNVQLPEEVRLKAESLNQKREEYLQRLRAESQSVPST EDFQCFHLWRSSKEAAAGEGGRWKGILELCVKGEPPVRLKSAQIWAASIVVVPVDSSEGS AALAAAAARRSASMEILADVNIPFFIDPAKPVRAAPAVRFQNHLARYEHIIPEVGVLTFH DRPDLDRMLHQFQEQGLFTESAPDTVLCAESSVAFHVGPLRGRHLTVFLISSKCGWACKV LAAVLPEEQRRQFLQNEGFLLMMQLEPQLAAEAAGPAAAPAPCQAAATPPPQPALLQHPQ AITAPPARHSADPSSHRPSVSWPPPPPPGAAMPIPPPTAAYAAPYYAAAVYPPPPPPPGV YPAGLLSREAAMAAAATGTAPSCWHQHQHLQEQEETLVVTRAYWRSTAREQQPPQDCAAA AAAAAAAAAAAAGSATSGLGFPLGMLPPAAWYLNHPPPSHRPPPPLPLAPPADHHCSHYN PLLEESKPPSPSPLSAAPAAPAAQPCSATPLPPSIICDPSTRRRTTEAPAEPPVVGHQHQ HQTRSQQTKAPPSPPARAPAGSLRGANCMASGRRRGPRISAAQLEELKDVFRAWMDDGLM HWCSDATNLKKKLEPFGMKVAEFAERYMLDEVHVRRDLGCGGAACIPKKPVVCYEGDSDF SDDEY NT seq 7758 nt NT seq  +upstreamnt  +downstreamnt atggcggcggacatcaaggagcagttgcttggcgtgaccttgaagcatatacagggccgt gtgtttgaggcagatgagttctacaaggccctcgagcctctgggaaccccggcggcctac gcggaggcgcttgtggacgtcttttggattacggctattccctcgacttgcaggatgctg tgggtgcgctttgaggttgggcgtgggccggagagcatgaacctggtcgcagcgattaaa gcgtgctggcaggataagagggtgacggagaagcagctgctccaggttctggagccggac tgcctgcacaccgtggggctgatccgggataagagcgtgtgggacaagaaggcggtgcgc tacaacaccaaactcaactacaccatccttaagtacaacctgctccgggaggacgcggag ggttatgccaagctggtaaccctgtacaaccactttggatcgggggctgtggggaaggag gatcttccctacctggcccgggagctgcagtccctgatcggctccttcgacctggacccc aaccgctgtctggacctgctgctggatgcggcggccgctcagcctcacaacactgccctg ctggaggcggtggggctgctcaagggcgaggcggtagggcagctgttgggcttcaaactg gaacagtaccaggacccctcccgggatcctgcccctcgcgagctcctgctggtggccgcc cacctggtccgcaccggccgcaccagcctgcaggagctgctgggccacctgtcgccctcg gacgagcagcaggcgacaggacagcgcagcgcccgggaggcgctcatgcggcgtgtgggg gacattgggcagatcaacttgggcgccgcatctgggggtgatgcagcggcgggcggggat gggggagacggccgggaccgcaacggcaagggcggccagcagccggacgccagcggccgc aacgtgcgcagcacgggcctctccgcggcctcgtttgagctggatccctccgcagcggtt gggcccctggctctgggacctgaccctcgccacaaccagccgctagctctgctggatgca ctgctgcaggtgggtgcctgggacgcggcagtggagcttcacgaccggctggtggcgcag ggggctacacccgccgcccacccgcccatttccgaagcgctgtcgcggctgctggctgct gaggttgcgcccgcgtatgacagcctgtttccgcagggtgtcctgggcagaaatgcgctg tggggcgacgtgccgccgtccggggcgacatctccgcagctgagccccatggccctccgg ctgctcaacatgctggggctgtacattcaccgcgacgttcgactgttcattaaggtactg cggattttgcgctaccagctcgccttcccgttaactaatgattcggggccggaacttggg gccggggcagcagccataacctcaacggcaggggcgccacaggccaacggacagccgcag cagactacggccgccgccgtgccccgcagcaccatgggccagaggcctgagcggtacggg cccctggacgagctgctggcgatggtgctgctacctgctcttagctgctgcccggtgcat ctgcccctggcggcggatgtctgggagtgcgtcaaactactgcccgtgcaatccagatac cgcatctatgcagagtataaggagctgtcccagtctcagcccctgctccaggctgcttgg cgacttgccaccgtagagaccaagaaagtcctcaagcgcctggtcctacccacggatcct cagaagaagaaggaggcgtgcaggccgcacgcgcgcatggtggccaaggtagcccacgct aacccgttgccggtcatggaggcgattgtgacgcagatcgaagtatacgacaaccaaatc gaggtttccctggaggctctcaagtacttgtcgtccttcagctacgacatgctgaccttt gtcatcctgtcccggcttgccattgagagggacaaggtgaaggaggacggtgtcaacatc tctggatggctacagtcgctggctaggtttaccggcgccgcctgcaggcggttctccgac ctggacgtgggcgcggtgctgcagttcctggtgaacacgctgagggggggggactcgttt gacctgctggtgctgcaacagatcatcgtggccatgacgggtgtccgtttggaagcagtt ctgtccgatgagcagctagacgctctggcgggcggtccggagctggtggcagaagcggtg gtgctggatgccggcgaggcggacgcggcactgggcatgggtcgcaccgcaagcgccaag gacctggccaaggggcgtcagcggctgctgagggcattagaggactacgacagccggcgg ctgggcgtcagcggcggcagctgctccctgacgctgcctctcctcatcctcacggcgcag cagcggtccatcatcattaaccacactgactccaagctcatcaagttcatagctaccatg tacgacagatgccaggacacgctgctgcacctgacggagttcctgcgactggccctgccg gtggagtcgtacgccgacatgctgcccacgccagacgtgctcaggcgcgagtacgggatc gacgtggaggtggtttggcacatctaccggcccgtcatggcgcggctgttggacgcggcg gcccctcagcctgccgaggagggggagctggaggagggcgaggagggcgccgcgccggcg gctggcccggccgatgcgcccccgcgtgaggagccgcgcgtgggtgacaagacctggggc ggtgtgctggcgggtctgccggcatgtgcggggaactcggctctgtggtcggtagtcacg ccggacctgtacaccacgttctggtcgctgcagctgcaggacatctacgtgccggtcaag aggtacgagaaggagctttccaatgtgaaggaccagctgcagctcctagataacaactac atgaactacattcggccagggctgcagagcaacagcggctacgtctcgaacaacctgcag cagcagtacgagcagtacaaagtggagaaggcggcgctgcaggagaagcagtcccgcctc accgcagagctggagcagcggcggcgccacgtagacgaggtgaagcaacggctggtgctg cagcgtgccggcttcttcctgccgcgggcaccgccgccgcagcagcaacaaccgcagcat cagcaggctgggcagcagcaagaggagggggcggatgcgtcgaagccagcagctccggca gcggctggcgctgccgcgacggcgaatggaccaaagggagctccctctggtgcggccggc ggggctatggcgtcaggggcaaatgctgcgggaccgggagggccagctcggccccccgcc cgcaacgtcccggccttctacgcagtggctcaggagatgttccttcctcgcatcctgttc agcgccatggacgccgtgtactgcgcccggctgatcctgctgctgcaccacatggaggtc cgccacttctcactcatacccttcctggacagcactttacgcgccaccatccccgtgttg cgctccatgacggaggtggaggccaacaactttggagtgttcctgtttgagatgctaaag cagctggtggcatggcaccgagatgaaaagctgttcaacgatgactgcgtccgcaagact gcggcacttgccaacgtcaagcagccgcacaacgtgttcaagtccaagatgatgttgtgg cacggcatcatcagctccaccttccgagcctccattgagagcggggactacacacagata gccaacgcgttgtccgtcatgggccgactggttacggtttggccgggtacggtaccctcc gccaactccttccgtcagtgggtggagaagctgcagaaagaggatccccgcgaggacatc aagaccatggcccgctcctacctcattgctcttagccgtgaggcagagaagccaggccgc atgatgtcacagttggagtacggtgggccgcaggtggtggagcggcaacgtgccatggcc agtagcgcggcgggccgaggtgccgcgaattcgccggcggccgcacccaagggcaccacc cggccagttgccggacccggccagccagcggcggcagggggcagtgccgcggcggcggca ccaaccgcaggtgaaggcggccacaagtcgctcaacgtcgccgccaagccctttgtgccc cgaggagcaggcccacctgagtcagccgcggcgcccggcggtggcggaggtggcgtctcc acggcagcgggcggcgcggcagacggtggcgacgccgccgcgggggatgctaaagacggg cgcggtcttgcaaccgtgcggaagcggccccgaggcgaggggagggctgacggcgacaag gccgaggccccggctgtggtagctgagaaggctgagaaagcggccgctggcgctgacgta ggcagtggtttgaaaaagcagcgtgtcgagagcggtgttggagctcaggcgggtggtgct gcagcagccgcggccgcagcagctgacgacactcggtccaacgttgcaggggggaacaag gtccgaggggttggcggtggtggcggcagcggtggtgatcgcgatggcacggatacaatg tccgaggccggcggtcgggcaggctccgagaccagcggccgtgttggcgcggacgggacg tccggcgggcgcgagggcaagtcggagaaggagcacaaagaacataagcggtcaaaagac aaggacaggcaagtacggagcctgcaaaagggcatagagaaggagcggggtggcaacaag gaaaaagataaagacaaagacaaggagcgggggaagggcgacagagaggacaaggacgag tcccgacgtgaggagaaggagcgccggcgcgaggaaaaggagcgggagcgagctgagaag gcggaggaggcgcgtgcggcggccaaggcggtgtttccggaccgcgatcgcgcggctggt gacagcaaagataacaaggatggccgtggggagagggtcccgggctcctcgactgcggtg gagaaggccgaccgtgagcgcagtgatgtcaagggcagtggaggccgtgtgggggttggc ccggcggacaacggcagctccaaggaccgggaagtccgggcatcctccgcggagcggtcc agggatcgccacggcaatcgccgcatcgggttgcctgaagatgccgctgaccgggagcgc gacacggcagatggtggcgggaagcggcggagaatggacggcaagtcggagggaggcagc ggcggcggggtcggcggggtcggcggcagccctggccacggcggtctttctgggcggttg ggcagcataacaccggaggttggaaccgccggccgaaggagcggcgccgatacggagatt gagtacgacgagaggggcgggtttgcgctaccaccggcgcctgcagtgcagcaccggatg cgcgacggcgaggtggccgaaatgcaaaccgcgctgcagtcggcgcagccgccggccccg cggggcagcagcagcagcagcggcagacatacagagccggctgcacacggaggtcgcagt ggtggagtggagcacacggtggcgggggagcaacggcagcagcagcgacagcagcggcag caaacgaagctgcgcctagccaagctgtcaaaagtacagctcaagtatctggattacctg aggcagctcattctgttgttaaatcaacatggcgtcttacatcctgaagctctggggcgc tccggggcctgcaacgttcaactgccggaggaagtccgtttgaaggctgaaagcctgaat cagaagcgcgaggagtacctgcaacgtcttcgcgccgagagccagtcagtgccctccacg gaggacttccagtgcttccacctctggcgctcttcgaaggaggcggcggcgggggaggga gggaggtggaagggtatcttggaactgtgcgtgaagggggagccgcccgtgcgcctcaag agtgcacagatctgggccgcatcgattgtggtggtgcccgtggattccagcgaggggagc gcggctttggcagctgcagccgcgcggcggtccgcgtcgatggagatactggccgatgtc aatattcccttcttcatcgaccccgccaagccggtgcgcgctgcacctgcagtgagattc cagaaccacctggcccgctacgagcacatcattccagaagtcggggtactcacgttccac gaccgacctgacttggacaggatgctgcaccagttccaggagcagggcttgttcacggag tctgccccggacactgttctctgtgcggagtcgtctgtggcctttcacgtagggcccctg cgggggcgccacttgacggtgttcctcatatcaagcaaatgcggctgggcgtgcaaagtg ctggctgccgtactcccggaggagcagcgccgccagttcctgcagaacgagggcttcttg ctgatgatgcagctggagccgcaacttgcagcagaagctgcaggaccggcagcagcaccg gcgccgtgccaagcagcagcgacaccaccgccgcagccagcactgttgcagcacccgcag gccataacagcgccgccagcacgtcattccgctgacccaagtagccatcggccatcggta tcttggccgccgccgccgccgccgggggcggcaatgccaataccgccgccgacggcggca tatgctgccccttactatgcagcagcggtgtatcctcctcctcctcctcctcctggggtc taccctgcgggcctattgtctagggaggcagcgatggctgcagccgcaacggggaccgcg ccatcctgctggcaccagcaccagcacctgcaagagcaagaggagacattggtggtgacc cgggcatactggcgcagcacagcccgggagcaacaacccccacaggactgcgctgcagca gctgcagcagccgctgctgccgctgcagctgctgcgggctcggcgacgtctgggctgggc ttcccgctggggatgctgccgcccgctgcatggtacctgaaccaccctccgccttctcac cggccgccgccgccgttgccattagcgccgccagcagaccatcactgcagtcattacaac cctttgcttgaagagtcaaagccaccatcaccatcaccattatcagcagcaccagcagca ccagcagcgcagccgtgttcggccacgccactgccgccgtcgatcatctgtgacccgtcg acccgcaggaggaccacagaggcacccgctgagccacccgtcgtgggccaccagcaccag caccagacccggtctcagcaaaccaaagcaccgccgtcgccgccagctagggccccggca ggctccttgcgtggcgcgaattgcatggcatcggggcgcaggaggggtccccgtattagt gcggcgcagcttgaggaactgaaggacgtcttcagggcgtggatggacgatgggctcatg cactggtgcagtgacgcaaccaatcttaaaaagaaactcgagccgttcggaatgaaggtg gcagagttcgctgagcggtacatgctggacgaggtgcacgtgcgccgcgacctcggctgc ggtggagcggcctgcattccgaagaagccggtggtgtgctacgaaggtgacagcgacttt tcagacgacgaatactga

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