Volvox carteri f. nagariensis: VOLCADRAFT_103431
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Entry
VOLCADRAFT_103431 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K17908
autophagy-related protein 18
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
VOLCADRAFT_103431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_103431
03029 Mitochondrial biogenesis [BR:
vcn03029
]
VOLCADRAFT_103431
Membrane trafficking [BR:
vcn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
VOLCADRAFT_103431
Mitochondrial biogenesis [BR:
vcn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
VOLCADRAFT_103431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
9620302
NCBI-ProteinID:
XP_002947339
JGI:
103431
UniProt:
D8TLT4
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MALSSKSGVLHVSFNQDCSCVALGSQQGVHIYNVDTHKLCYRYAIGAVSIVEMLFCTSLV
GFVGAGEQPALTPRKLTVMNTSASRVIQELSYPISVLAVRMNRQRLVVVTSQAVHVYCLS
KLACLRVIETENNPGGCCALTCCHEPNLLALPSSSRTGTVRIYDLTQEGQGNVLSEVQAH
QSPVVAAFKDTFWSVLRLTVLAWSSDGGLLATATAKGTLIRVHRMPRAARSHSFRRGATS
ATIQSLAFGPVGLPVQLLVAASSHGTVHVFRLEDPEPCGGGLLPRPGGSVAGGLLSAVVK
YSSQMVGDLVEPARNIATIRLPRSVGIAICAFRSQPGNCYCYSASPELATAAVATTATAT
SPAEAIHPNSRVTVAGPPGPPGCDPGSAAAGAAVVQAELGSGDRGEAKSACGGRSAWGGT
TGGSGGGWGGVRCGTAGGGDAGAGVCGGGRWQEGLLYEYTLTDLLSQQGPKCNLDGEWSM
VIEVSYVGWYEGSVRPQDVCTLPTWVGRMPVGGVLWPSGSAVRVKATQQGHQLQQRTGSV
QSPIPSLSYTSFREKLAAMCSAVGIKRGIMPHSMRIGGNSAAAARGVSEEARKAHGRWKT
DAMVQLYTRMEDDAALETTRNLGLA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcaagcaaaagcggcgtcctgcacgttagcttcaaccaggactgctcctgt
gtggcacttggtagtcagcaaggcgtgcatatctacaacgttgatacgcacaagctgtgc
taccgttacgcaattggtgctgtcagtatcgtggagatgctcttctgcaccagcctcgtg
ggctttgtgggggccggtgagcaacccgccctgacaccccgcaagctgacagtcatgaac
acgagtgcaagtcgggtcatccaggagctgtcgtacccgatatccgtactagcagtacgg
atgaaccggcagaggctggtggtggtgacctcccaagctgttcacgtctattgcttgagc
aagcttgcatgtctgcgggtcattgagacggagaataaccccggggggtgttgtgcgcta
acttgctgccacgaacccaacctccttgcgcttccctcctcgtcaagaacgggcaccgtc
cgtatctacgacctgacccaggagggccagggtaatgtgctgagcgaggttcaggcccat
cagtcgcccgtggtcgccgccttcaaggacaccttttggtcagttctacgtctgacggtg
cttgcctggagctccgacggcggcctcctcgccaccgccaccgccaaggggaccctcatt
cgggtccaccgcatgccgcgggcagctcgcagccacagcttccgacgcggcgccacgtca
gccaccattcagtcgctggcatttggacccgtgggtctgcccgtacagctgctggtggcg
gctagcagccacggcacggtgcatgtgtttcgattggaggatccggagccctgcggcggc
ggactgcttcccaggcccggcggctcagtcgcaggcgggttactttccgccgttgtgaag
tactcctcgcagatggtgggggacctggtggagcctgctcgcaatatcgccaccatccgc
ctgccgcggtcagtgggtatcgctatctgcgccttcaggagtcagccaggcaactgctac
tgctacagcgcatcgccggagctggcaacagccgcagtagcaactacagctacagccaca
agcccggcggaagcgatccacccaaactccagggtaactgttgcgggcccgccggggccg
ccggggtgcgacccgggatcagccgccgccggagctgctgtcgtacaggcggagctcgga
tcaggagatcgtggtgaagcaaaatctgcctgcgggggacgtagcgcctgggggggtacg
acagggggtagcggcggcggctggggcggtgttcgctgcgggacggcgggtgggggtgat
gcgggtgcgggtgtgtgtggcggcggcaggtggcaggagggcttgctgtacgagtacacg
ctgacggacctgctgagtcagcagggcccgaagtgcaacctggacggggagtggtctatg
gtgatcgaagtgtcgtacgttggctggtacgagggctctgtacgaccccaggacgtttgc
acccttccgacgtgggttgggagaatgccggtggggggcgtgttgtggccgtcgggcagc
gctgtgcgggttaaggcgacacagcaaggccaccagctgcagcagaggaccggctctgtt
cagtcaccgatccccagcctcagctatacctccttccgggagaagctcgctgccatgtgc
agcgccgtgggcatcaagcgcggcatcatgccacactccatgcgcatcgggggaaacagc
gcggcagcagccagaggggtatctgaagaagcccgcaaggcccacggtcgctggaagacg
gacgcaatggtgcagctatatacccggatggaagacgatgccgcactggaaaccacgcgc
aacctgggcctcgcctga
DBGET
integrated database retrieval system