KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_103431
Entry
VOLCADRAFT_103431 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K17908  autophagy-related protein 18
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    VOLCADRAFT_103431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vcn04131]
    VOLCADRAFT_103431
   03029 Mitochondrial biogenesis [BR:vcn03029]
    VOLCADRAFT_103431
Membrane trafficking [BR:vcn04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    VOLCADRAFT_103431
Mitochondrial biogenesis [BR:vcn03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    VOLCADRAFT_103431
SSDB
Motif
Pfam: PROPPIN WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 9620302
NCBI-ProteinID: XP_002947339
JGI: 103431
UniProt: D8TLT4
LinkDB
Position
Unknown
AA seq 625 aa
MALSSKSGVLHVSFNQDCSCVALGSQQGVHIYNVDTHKLCYRYAIGAVSIVEMLFCTSLV
GFVGAGEQPALTPRKLTVMNTSASRVIQELSYPISVLAVRMNRQRLVVVTSQAVHVYCLS
KLACLRVIETENNPGGCCALTCCHEPNLLALPSSSRTGTVRIYDLTQEGQGNVLSEVQAH
QSPVVAAFKDTFWSVLRLTVLAWSSDGGLLATATAKGTLIRVHRMPRAARSHSFRRGATS
ATIQSLAFGPVGLPVQLLVAASSHGTVHVFRLEDPEPCGGGLLPRPGGSVAGGLLSAVVK
YSSQMVGDLVEPARNIATIRLPRSVGIAICAFRSQPGNCYCYSASPELATAAVATTATAT
SPAEAIHPNSRVTVAGPPGPPGCDPGSAAAGAAVVQAELGSGDRGEAKSACGGRSAWGGT
TGGSGGGWGGVRCGTAGGGDAGAGVCGGGRWQEGLLYEYTLTDLLSQQGPKCNLDGEWSM
VIEVSYVGWYEGSVRPQDVCTLPTWVGRMPVGGVLWPSGSAVRVKATQQGHQLQQRTGSV
QSPIPSLSYTSFREKLAAMCSAVGIKRGIMPHSMRIGGNSAAAARGVSEEARKAHGRWKT
DAMVQLYTRMEDDAALETTRNLGLA
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggcgctgtcaagcaaaagcggcgtcctgcacgttagcttcaaccaggactgctcctgt
gtggcacttggtagtcagcaaggcgtgcatatctacaacgttgatacgcacaagctgtgc
taccgttacgcaattggtgctgtcagtatcgtggagatgctcttctgcaccagcctcgtg
ggctttgtgggggccggtgagcaacccgccctgacaccccgcaagctgacagtcatgaac
acgagtgcaagtcgggtcatccaggagctgtcgtacccgatatccgtactagcagtacgg
atgaaccggcagaggctggtggtggtgacctcccaagctgttcacgtctattgcttgagc
aagcttgcatgtctgcgggtcattgagacggagaataaccccggggggtgttgtgcgcta
acttgctgccacgaacccaacctccttgcgcttccctcctcgtcaagaacgggcaccgtc
cgtatctacgacctgacccaggagggccagggtaatgtgctgagcgaggttcaggcccat
cagtcgcccgtggtcgccgccttcaaggacaccttttggtcagttctacgtctgacggtg
cttgcctggagctccgacggcggcctcctcgccaccgccaccgccaaggggaccctcatt
cgggtccaccgcatgccgcgggcagctcgcagccacagcttccgacgcggcgccacgtca
gccaccattcagtcgctggcatttggacccgtgggtctgcccgtacagctgctggtggcg
gctagcagccacggcacggtgcatgtgtttcgattggaggatccggagccctgcggcggc
ggactgcttcccaggcccggcggctcagtcgcaggcgggttactttccgccgttgtgaag
tactcctcgcagatggtgggggacctggtggagcctgctcgcaatatcgccaccatccgc
ctgccgcggtcagtgggtatcgctatctgcgccttcaggagtcagccaggcaactgctac
tgctacagcgcatcgccggagctggcaacagccgcagtagcaactacagctacagccaca
agcccggcggaagcgatccacccaaactccagggtaactgttgcgggcccgccggggccg
ccggggtgcgacccgggatcagccgccgccggagctgctgtcgtacaggcggagctcgga
tcaggagatcgtggtgaagcaaaatctgcctgcgggggacgtagcgcctgggggggtacg
acagggggtagcggcggcggctggggcggtgttcgctgcgggacggcgggtgggggtgat
gcgggtgcgggtgtgtgtggcggcggcaggtggcaggagggcttgctgtacgagtacacg
ctgacggacctgctgagtcagcagggcccgaagtgcaacctggacggggagtggtctatg
gtgatcgaagtgtcgtacgttggctggtacgagggctctgtacgaccccaggacgtttgc
acccttccgacgtgggttgggagaatgccggtggggggcgtgttgtggccgtcgggcagc
gctgtgcgggttaaggcgacacagcaaggccaccagctgcagcagaggaccggctctgtt
cagtcaccgatccccagcctcagctatacctccttccgggagaagctcgctgccatgtgc
agcgccgtgggcatcaagcgcggcatcatgccacactccatgcgcatcgggggaaacagc
gcggcagcagccagaggggtatctgaagaagcccgcaaggcccacggtcgctggaagacg
gacgcaatggtgcagctatatacccggatggaagacgatgccgcactggaaaccacgcgc
aacctgggcctcgcctga

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