Volvox carteri f. nagariensis: VOLCADRAFT_103485
Help
Entry
VOLCADRAFT_103485 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_103485
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Other ribosome biogenesis factors
VOLCADRAFT_103485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
9620371
NCBI-ProteinID:
XP_002947547
JGI:
103485
UniProt:
D8TM78
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MHQRYLTPSFHGPLRLRVLSVRAGRPSGGSTTHPIIIFLLAPTSLVFIHYHSVFNVESTL
FLSIFWGFRRYKSERPGSSRDRPWAGRANRGNEDERRDERRYGSQGDGEYGGGKRYGAHR
QRESGEGRRGEDEWRRRRHGGDGHDGTNRRNWPVSEATSGPDNRRAQQKPLSGTAAEQPQ
QLKRRERDDYGDGGDDRGYDTEYDEASYEDAGEGDERTGAAGGRRRNEGSAAGPCLRDTL
QGEALYGVFPVLAALRAKRRKVHRAFILSSMDLSKRKDAGLVRQVEALCSEAGVEVVRTG
RHELNLMSYDRPHQLAEMDEFPPADEVIAAAAGAVHGGAAGTAAPPVWLALDEVVDPQNL
GAVVRSAYCLGAGGVLACARNCAPLSAVVSKASAGALEALQVHSCRNLPRTLMDARDRKG
WTVLGAAAGSGSEAVGRVVVDRPTILVLGSEGFGLRTNVRRACSGLVRVDMAPPTTARAG
RGISIPSSADDADAAVATNLRQPLPPSPPLPRQQQPQHAVLRGLVDSLNVSVATGILLHS
LINSAASTAAAGPSAATATGAVPADTTEISSGRPTNGAVGNACFSRTLSGNEAHARACVK
KAAWDKGGVGESKCPEGRKD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagcgatacctgacgccctcgttccacggacctctgcggctgcgggtgttgtct
gtccgtgccgggcggccatcgggagggtcaacgacacacccaatcatcattttcctgttg
gctcctacttcgctcgtgttcatccattatcactccgtctttaatgtagagtctactctc
tttttatctattttctggggatttcgtagatacaaatcggagcggcctggcagctctcga
gacaggccatgggctggcagagccaatcggggcaatgaggacgagcgaagggacgagcgt
aggtacggcagtcaaggcgacggcgagtacggtggaggcaaacggtacggcgctcaccga
cagcgtgaatccggcgagggacgccgtggggaggacgagtggcggcggcggcggcacggc
ggtgacggccatgatggcaccaaccgtcgcaactggccggtttcggaggcgacatcgggc
ccagataaccggcgggcgcagcaaaagccgctttctggaacagcagccgagcagccgcaa
cagttgaaacggcgcgaacgggatgattacggtgacggaggagatgacagagggtacgac
accgagtacgacgaggcttcgtacgaagacgcaggtgaaggtgatgagcggactggcgca
gctggcggccgccgccgcaatgaaggcagcgccgctggcccttgcttacgtgatacactc
cagggagaggcgttgtacggcgtgttccccgtactggcggcgctgcgggcgaaaaggcgg
aaggtgcaccgggccttcattctctcatccatggacctgtccaagcgcaaagatgcggga
ctggtacggcaagtggaggcgctgtgttcggaagccggggtggaggtggtgcgtactggc
cgacatgaactcaacctgatgtcgtacgaccgaccgcaccagttggccgaaatggacgag
tttccgccggcggatgaggtcatcgcggcagcggcgggtgccgtacacggtggcgctgcc
ggtacggcagctccgcctgtatggctcgcgctggacgaggtggttgacccgcaaaacctg
ggtgctgtggtaaggtcggcttactgcctgggtgctgggggagtgctggcctgcgcacgt
aactgcgcccccttgagcgctgtggtgtccaaggccagtgcaggtgcgctcgaggccctg
caggtgcacagctgccgcaacctgcctcgcaccttgatggacgcgcgggatcgcaagggc
tggacggtgctgggggcggcggccgggagcggctcggaggccgtcggtcgcgtcgtcgtg
gaccgacccaccatcctcgtgctcggtagcgagggttttggtctccgtaccaatgtacga
cgagcatgcagcggtctggtacgggtggacatggcccccccaaccactgctcgcgctggc
aggggcatttccattccgagcagcgcggacgacgcggacgcggcggtggcgacgaacctg
cggcagcctttgccgccgtcgccgccgctgccacgacagcagcagccgcagcatgccgta
cttcgtggcctcgtagactcgctgaatgtgtcggttgctacgggaattctcctgcattcg
ctcatcaattcggcggcatcaacagcggcggctgggcctagtgctgctactgctacaggg
gctgtgccagcggacacaacggagatctcgtccggaaggccaacaaacggcgctgttggc
aacgcctgcttttccaggacgctctcaggcaacgaggcccatgctcgcgcgtgcgtcaaa
aaagcagcatgggataagggcggggtcggggagtccaaatgccccgaaggcaggaaggac
tga
DBGET
integrated database retrieval system