KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_103611
Entry
VOLCADRAFT_103611 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_103611
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    VOLCADRAFT_103611
SSDB
Motif
Pfam: BING4CT LRR_8 LRR_1 WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st LRR_4 Beta-prop_EML_2 WD40_WDHD1_1st LRRNT_2 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd PRA1 Beta-prop_Aladin Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 9620870
NCBI-ProteinID: XP_002947977
JGI: 103611
UniProt: D8TNC3
LinkDB
Position
Unknown
AA seq 1810 aa
MAEGEAPHQGGEGKTSKKRKKVRDPDAADAAKRLKRGPSVDLKSITDKKLKGKLRRAEAV
FASSQKKAAQINEWLLPASAGTLEAEGIERTWNFKQEAIVQAVDVTAARKAFDLSLPELG
PYRLNFTRNGRFMVLGGNLGHLAVMDWQRSHLVCEVQVRETVRDVVFLHNETFFAAAQKK
YVYVYDKRGLEVHCLRDHTEVNALDFLPNHFLLTSIGEHGVLRYQDTSTGHIVAQHKTRL
GPCSLMRHNPHNGIMLLGHLRGCVTMWTPNLTTAAVKMLCHRGPVKALAVDPSGTYIATS
GVDSQIKVWDIRMLQPMHAYYSHAPVTQMDISQRGLLAVGYGRKVQIWQDALRSKAQSPY
LTHHLPEGVLETFRFCPYEDVLGIGHSAGISTILVPGAGEPNFDSFVANPFQTVKQRREQ
EVVALLDKLQPDTIVLDPDTIGRVRKEPADVMKERREEEAAANTARLVAMRRKSEVKAKM
KGKNKPSRRHRKKQSNIIEDRKPSIQERQKEEAVRRKEAAQKKSQAAIPEDAPRARSVQQ
LPQGPSPARVERSRGLGGAASTVIHCRASLPHLCDPLFPIVGYLKYLDGNSLTGPLPGMW
AALRSLRELRLRNNNLSGGCLPASWGGGLASLQYVDISLNPQLCASDAGPSNGGPPASWG
RLGFLRSMALQNTGLAGTLPPEWAFMRRLVQMDLSENNIAGTLPEEWAAASDVSAGIGFF
GNGDGSTTITNGGISSSGGLDQLRFMDLSRNSLQGPLPPAWSRLQSLQHLSLHTNALSGT
VPEAWGSLHGLAGLRLHSNAALCGPLPHVMLGGPIASSAVGGGGSGDGGGVGGDGGGVVG
EATTALAAAINGTALLRECVWARTAGLLQDIRRSLTDPRGALATWVEGTDPCGAVASRRW
AGVVCDVNAGAAVADSVDGRVGGGLGVVGLALQDMGLRGSLPPQLALLGNSLRQLSLDGN
SLSGTLPGTWALLGGLTKLTAARNTISGSLPAAWSALHNLSYLDLSYNTLRGSLPGSWGE
GMTSIRHIHLDGNALNGSLPASWAGGSDGSSTGSNNNNSMAALRYLTADGNSLSGGLPAA
WSLLGQLREVSLKDNLLEGPVPPSWLEDLGFLRYLGLSFNRGLCGRVPFLLDPGEGKAGG
GDSRTTTTASNTSSTSVTPSASSAPPPSGTPAIPTANAAAAAATADDADESPGFRLEADS
TQLGAPCPDTGGGKGPVAASVLLWATAGASSVGTLVLVGLLTAAAHAANRFRNQRNKDAG
SAKAAAALAAPAQSSSPRAPPPSPRLLNITGGPLSLSFLQGYSPSRLPSSTSPAHRATTS
PSRTAAAATTRNGPPDGTHVFGRTAANGDLPSAASPAPQAAAHRSPRSPAAPPSSLPRLE
VHGLQLRIPGRHEGCGTGGAEAVSPPSPSASTSASPHLACFSGAGVSSPRRPASERDGGS
SCGATPAGRLPSALSSPSGSARRNHPVCLVTRAMGSLLGHRPSGGGTGPQTSSPRGHLPR
GELSEEDTAAAAEIYQGLLMSGETVATASEQQLWGYELGEQWGAGSAADELEQERSGRPR
SPQAGSFPASSFQATQQSLQYSQATDLRVIGRAATPHSPTSPSASRPAARPAAAVRGSPA
RPPPNAASPPPLPAHDLRQQEHRSLGLRASPDLNLNNNAATDKLDGKLSRQLSSEPEPDS
SCTFPAVPLQASVEVAVTVCATGSSPRLLAPMQGQDEDSLVATAPQLLPQSKPVLLPQQQ
YEHPPLQAALTFMVREVVNLDEYDGGSAGNGEKVAVLENEGEEEEEEEKAQNQESMKNAA
VRGVPKLDRP
NT seq 5433 nt   +upstreamnt  +downstreamnt
atggcggagggcgaggccccacaccaaggtggagaggggaaaacaagcaaaaaacgaaaa
aaggtccgcgacccagatgccgctgacgctgccaaacggctgaaacgcggcccatccgtg
gacctgaagtccattaccgacaaaaagctcaaagggaagcttcgcagggcggaggcggtg
ttcgccagctcgcagaaaaaggcggcgcagatcaacgaatggctgctgccggcgtcggcg
gggacgttggaagcggagggcattgagcgtacatggaacttcaagcaggaggctatcgtg
caggcggtggacgtcacggcggcgcgcaaggcctttgacctgtctctgccggaactaggc
ccctaccgactgaacttcacgcgcaacggccgcttcatggtgctgggcggcaacctgggt
cacttggctgtcatggactggcagcgatcgcacctcgtgtgcgaggtccaggtccgggag
acggtccgtgatgttgtgtttctgcacaacgagaccttttttgcggcggcacagaaaaag
tacgtgtacgtgtacgacaagcggggcctggaggtgcactgcctccgagaccacacggaa
gtgaacgcgctggacttcctgccaaaccacttcttgttgacgtccataggagagcacggt
gtgctacggtaccaggacaccagcacgggccacatcgtagcacaacacaagactcggctg
gggccgtgcagcctgatgcgccacaacccgcacaacgggatcatgctgctgggccatctc
cgcggctgtgtgaccatgtggacccccaacctcaccaccgcggccgtcaagatgctgtgc
caccggggcccggtgaaggcgctggctgtggaccccagcgggacttacatcgccacctcg
ggggtggactcccagatcaaggtgtgggacatccgcatgctgcagccaatgcacgcctac
tacagccatgcccccgtgacccagatggacatcagtcagcgcggattgctggcggtgggg
tatggccgcaaagtgcagatttggcaagacgcgctgcgcagcaaggcccaatcaccttac
ctgacccaccacctgccggagggtgtgctggagacgttccggttctgcccttacgaggat
gtgctggggatagggcattcggctggcatcagcacgatactggtgccgggtgctggtgag
cccaatttcgactccttcgtagccaaccccttccagaccgtcaagcagcggcgggagcag
gaggtggttgcactgctggacaagctgcagccggataccattgtgctagacccggacaca
attggcagggtccgcaaagagcccgccgacgtgatgaaggagcgccgggaagaggaagct
gccgcgaacacggctcgtctggtggcgatgcggcgcaagtcggaggtcaaggccaagatg
aagggcaagaataagcccagtcggcggcatcgcaagaagcagagcaatatcattgaggac
cgcaaaccctccattcaggagcgacagaaggaggaggcggttcgtcggaaggaggcggcc
cagaagaagtcacaggctgccattccagaagacgctccccgagcccgttctgtccaacaa
ctccctcaagggccatctcccgctcgcgtggagcgctctcgaggacttggaggtgctgcg
tccactgtcatccactgccgcgcctccctgccgcatctttgcgaccccctcttccccatt
gttggctaccttaagtacctggacggcaactcgctcactgggccgctgccgggcatgtgg
gcggccctacgaagccttcgagagcttcgccttcggaacaacaatttgtcaggcggctgc
ttaccagcttcgtggggtggaggactggcctccctgcaatacgtggacatcagcctgaac
ccacagctctgcgccagcgacgcaggtccgtccaacggcggccctcccgcatcgtggggt
cgtctagggttcctgcgctccatggcgcttcaaaacacaggtctcgcgggcacgctgccg
ccggaatgggctttcatgcgacggctcgtccaaatggacttgtcagagaacaacattgcg
ggcacgctaccggaagagtgggccgcggcctcggacgtaagcgccggcatcggattcttc
ggtaacggcgatggcagcaccaccatcaccaacggcggcatcagtagcagcggagggctg
gatcagctccgtttcatggacctgagccgcaactccctacaggggccactgccgcccgcc
tggtcacgtctgcaatccctgcaacacttgagccttcacaccaatgcgctatcggggaca
gtgcccgaggcctggggctcactacacgggctcgctggcttgcggctccattccaatgcg
gccctgtgtggtccgctgcctcacgtcatgctggggggccccatagcttcgtcggctgtt
gggggcggcggcagcggtgatggtggtggtgttggtggtgacggtggtggcgtggtgggc
gaagctaccacggctttagcggcagccatcaacggcactgccctgctacgggaatgcgtc
tgggctcggacagctggcctgctgcaagacatccgccgctcgcttactgacccacggggc
gccctggccacctgggttgagggcactgacccttgcggagccgtcgccagccgccgctgg
gcaggtgtggtctgcgacgtgaacgcgggcgcggcagtcgccgacagcgttgacggtcgt
gttggaggtggccttggcgtggtcggcctggctctacaggacatgggcctgaggggctcc
cttccgccccagttggcgctactaggaaacagtctgagacagctgagcttggatgggaac
agcttgtcaggcaccttgcccggcacctgggcgctgctagggggcctcactaaactaacc
gcagcgaggaacaccataagcggctccctgcctgctgcctggagtgcgctgcacaatctg
tcgtacctggacttgtcgtacaacacccttcggggatccctgccaggctcttggggcgag
ggcatgacaagcatccgccacatccatctggacggaaatgcactcaacggatcactgccg
gcatcttgggccggcggcagcgatggcagtagcaccggcagtaacaacaacaatagcatg
gcggcgcttcgctacctgacggcagacggtaacagcctgagtggcggcctgccggcggcg
tggagcctgttggggcagttgcgggaggtcagtctcaaggataacctgctggaggggccg
gtgccgccaagctggttggaagacctcgggtttcttaggtacctgggtctcagcttcaac
aggggcttgtgtggacgtgtccctttcctcctcgaccctggcgagggcaaggccggtggc
ggggattccaggaccactaccacagcgtccaacaccagttcaacctccgtaacgccatca
gcctcatccgctcctcccccatccggcacacccgccattcccactgcgaacgctgctgct
gctgctgctactgctgacgatgcggatgaatctcccggatttcgtctggaggcggattct
acgcagctgggagctccctgccccgacaccggcggcgggaagggccccgtggccgccagc
gtgctgctgtgggccacagctggtgctagctcggtcgggaccttggtgctggtgggcctg
ctaaccgctgccgcacacgcggccaaccgcttccgcaaccagaggaacaaggacgcgggg
tcggcgaaggcggcggcggctctggccgcgcctgcgcagtcgtcctcaccgagggcccca
cctccgagcccccgcctgctgaatatcaccgggggacccctgagtctgtcgttcctccag
ggctactccccaagccgcctgccgtccagcaccagtccggcacaccgtgcgaccacatcc
ccctcccgaactgcagccgctgccaccacccgtaatgggcctccggacggaactcacgtc
ttcggacggacggcagccaatggggacttgccttcggcagcgtcgccggcgccccaggcg
gctgcccacagatcgccacgcagtcccgcagcaccgccgtcatcgttgccgagactggaa
gtgcacgggctgcagctgcgcattcccgggcgccatgaaggatgcggaactggcggcgcg
gaggctgtgtcgccgccgtcgccgtcggcgtcaacgtctgcgtcgccgcacctggcctgt
ttcagcggcgctggcgtgtctagcccgcgccggcctgcttcggagcgagacggcggcagc
agctgcggcgcgactcccgctggccgcctgcccagcgccctcagctcaccttccggttcc
gcgcgtcgcaaccaccctgtttgccttgtcaccagggcaatgggctcgcttctgggtcat
cgccccagtggcggcggcaccggtccgcagacctcctcgccccggggacatctcccccgg
ggagagttatccgaagaggatactgcagcagcagcggagatctaccagggactgctcatg
tccggcgagacggtggcgacggcttcggagcagcaactgtggggctacgagctgggggag
cagtggggtgccggatccgccgctgatgagctggagcaggagcgctccggcaggccccgg
tcgcctcaggcggggtcatttccggccagttccttccaagctacccaacagtccctgcag
tactctcaggcaaccgaccttcgggtcatcggcagggccgctacaccgcattcgcccacc
tcgccctccgccagccggcccgcggctcgccccgccgccgcggtgcgcggctcaccagcc
cgcccaccgcccaatgccgcgtcgccgccgccgcttcctgcgcatgacctccgccagcaa
gaacaccgcagcctgggtctgcgcgcctcacctgatctaaacctcaacaataatgccgcc
accgacaagctcgacggcaagctctcgcgccaactgagcagtgaacccgaacccgactcg
tcatgcaccttcccggcagtaccgctgcaagcgtcggtggaagtggccgttacggtgtgc
gccaccggtagctcgccccgtttgctagcgcccatgcagggccaggacgaagactccctg
gtggcgacggcgccgcagctgttgccgcaatcaaagccggtactgctgccacagcagcaa
tacgagcacccgccgctgcaggcggccctgaccttcatggtacgggaggtggtgaacttg
gacgagtacgatggtggcagtgctggcaatggcgaaaaggttgcggtattggaaaatgag
ggtgaggaggaggaggaggaggagaaggcgcaaaaccaggagagcatgaagaacgctgcg
gttcgaggggttccgaagctagatcggccatga

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