Volvox carteri f. nagariensis: VOLCADRAFT_103670 Help Entry VOLCADRAFT_103670 CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism vcn  Volvox carteri f. nagariensis Pathway vcn03040   Spliceosome Brite KEGG Orthology (KO) [BR:vcn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VOLCADRAFT_103670  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcn03019]     VOLCADRAFT_103670    03041 Spliceosome [BR:vcn03041]     VOLCADRAFT_103670 Messenger RNA biogenesis [BR:vcn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      VOLCADRAFT_103670 Spliceosome [BR:vcn03041]  Complex B   Other components    Prp19-related factors     VOLCADRAFT_103670  Complex C     VOLCADRAFT_103670 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf Mad3_BUB1_I TPR_12 TPR_15 RPN7 UTP6_C TPR_16 DUF6325 Motif Other DBs NCBI-GeneID:  9621229 NCBI-ProteinID:  XP_002948042 JGI:  103670 UniProt:  D8TNP7 LinkDB All DBs Position Unknown AA seq 860 aa AA seqDB search MRGHCELFLVATRCGAPQCESRDLNVPANLWHAYLSARQLAVRGLRPDDVAFEALNNTYE RALVTMHKMPRIWLQYLQLLMEQRLVTRTRRTFDRALASLPITQHDRVWQLYLGRWEEAA QKLAELLNDDTFRSLEGKSKHALWLELCDIITKHPKDVSGMRVDAILRGGIRRFTDEVGR LWTSLADFYIRRSMFEKARDVYEEGLCSVLTVHDFSLIYDAYTQPLTEPLDLQFEESLLS ASMEQLAEDDEDGMAVDDDDGADFLLKDDGNDVDLRLARLEHLMNRRPELLSSVILRQNP HNVAEWHKRVKLFEGKPTKQILTYTEAVRTVDPDKATGKPHSLWCAFAKFYERHGDVPNA RIIFQKATEARYKYVDDLAQVWCEWVEMELRHSNFKRALDLVKRVLTPPPRPARMTQEEE RALPVQDRVYRNLKLHLMHTDLEESLGTRESTCEAYDRILELRIATPQVILNYALFLTEQ KAFEDAFKVYERGIALFKYPHVKDIWSAYLAAFVDRYGGKKLERARDLYEQAIKDAPAQD CKSLYLDYAKLEETHGLARHAMDIYARALQAVPKDQRKAIIDIYVREIYESAIEAEPPND LSDDDVRELCMRYAALETKLGEIDRARAIYVHGSAVSHPDRAADYWAAWRAFEVRHGNED TFKEMMRILRSVKVSFSHMQINSIVDAARITSRAEAEAGVGAGAKRAREGVDAMAELEAE AVAAMGLGAAAGGAGSSGRTALSGFVSAGVIQQGGEKDGTAADGAQPQRKAPAAANPEEI DLDADDDDGGAAADMDVAQKAVPAAVFGGFCLNVFAECRVADAVVVAFVLVILAPEQRKQ QIKQQLCRKFSVLCANSVYS NT seq 2583 nt NT seq  +upstreamnt  +downstreamnt atgagagggcattgcgagctcttcctggtagctacaaggtgtggggcgccgcagtgcgaa agcagagatctcaatgttccggccaatctatggcatgcgtacctttcggcgcggcagctg gctgtccgcggcttgcgaccggacgatgtggccttcgaggccctcaacaacacgtatgaa cgggcccttgtcactatgcacaaaatgccacggatttggcttcagtacttgcagctatta atggagcaacggcttgtgacgcgaactcggcggacatttgaccgggcccttgcctcgctc cccattacgcagcatgaccgcgtctggcagttgtacctgggacgctgggaggaggctgcc cagaaactggcggagctgctgaacgacgatacgttccggtcattggagggcaagagcaag catgctctatggctagagctatgcgacatcatcacaaagcaccccaaggacgtttcgggg atgcgggtggacgccatcctgcgcggcggcattcgccgcttcacggacgaggtgggtcgg ctgtggacgtcgctggcggacttttacattcggcgcagcatgttcgagaaggcgcgggac gtctacgaagagggcctctgctcggtgctgaccgtccacgacttctccctcatctacgac gcgtatacacagcctttgactgagcccctggacctgcagtttgaggagagcctcctgtca gccagcatggagcagctggcagaagatgatgaggacggcatggctgttgacgatgacgac ggggcggactttctgctgaaggatgatggcaacgacgtagacttgcgcctggctcggttg gagcacctcatgaatcgccgcccggagctgctgtcctccgtcatcctccggcagaaccct cacaacgtggcggagtggcacaaacgagtgaaactgttcgaggggaagccaacgaagcag atcctcacgtacacggaagcggttcgcaccgttgacccggacaaggcgactgggaagccg cattccctgtggtgcgctttcgccaaattttacgagcgtcatggtgatgtgcccaacgcc agaatcatcttccagaaagcgactgaggcgcgctacaagtacgtggacgatctggcgcag gtgtggtgcgagtgggtggaaatggagcttcggcacagcaactttaagcgtgccctggac ctggtcaagcgggtgctcacgccaccgccgcgaccagctcgcatgacgcaggaggaggaa cgtgcgctacctgtgcaggaccgcgtttacaggaatctaaagctgcacctgatgcacacg gatctggaggagagcctggggacacgcgagtccacatgcgaggcctatgaccgcatcctg gagctgcgcattgccacgccgcaggtcatccttaactacgcgttgtttctcacggagcaa aaggcctttgaggacgccttcaaggtatatgaacggggcattgcattgttcaagtaccca cacgtcaaggacatctggtcagcctatctggcggctttcgtggatcgttacggcggcaag aagctagagcgtgctcgggacctttacgagcaggccattaaggacgcgccggcccaggac tgcaagtcgctttacttggactacgccaagctggaggagacacacggcctggcccggcac gccatggacatctacgcgcgggcgctgcaggcggtgcccaaggaccagcgcaaggccatt atcgacatctacgtgcgtgagatttacgagtcggccattgaggccgagccgcctaacgac ctttccgacgatgacgttcgcgagctttgcatgcgctacgccgcgctggagaccaagctg ggtgagatcgatcgcgcgcgtgccatctacgtgcacggctcagccgtcagccaccccgac cgcgcggccgactactgggcggcgtggcgcgcattcgaggtgcggcatggcaacgaagac acgttcaaggaaatgatgcggatactcaggtccgtcaaggtgagcttcagccatatgcag atcaactcaattgtagatgccgcgcgcatcacatctcgagccgaggcggaggcgggtgtt ggggcaggcgccaagcgggcccgtgagggtgtcgacgccatggcagagctcgaggcggaa gcagtggcggcgatgggactgggcgcagccgcagggggcgctgggtcgtcgggacggacg gccctttcgggcttcgtgtctgccggggtcatccaacagggtggcgaaaaggatggcacc gctgcggacggagctcagccccaacgcaaggcgccagctgcagccaaccctgaggagatc gacctcgacgcggacgacgacgatggtggcgctgcggctgatatggacgtggcgcagaag gctgtaccggctgccgtattcggcggcttctgccttaatgtctttgcggagtgcagagtt gcagatgccgtggtagttgcattcgtgttagttatcctggctccggagcaacggaagcaa cagataaaacagcagctctgcaggaagttttccgtgctgtgcgcaaattcggtgtacagc tga

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