Volvox carteri f. nagariensis: VOLCADRAFT_103767
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Entry
VOLCADRAFT_103767 CDS
T01330
Symbol
syp4
Name
(RefSeq) Qa-SNARE, Tlg2/Syntaxin16-family
KO
K08489
syntaxin 16
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
VOLCADRAFT_103767 (syp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_103767 (syp4)
Membrane trafficking [BR:
vcn04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
VOLCADRAFT_103767 (syp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Synaptobrevin
MCPsignal
Orf78
TMEM154
DUF2209
Motif
Other DBs
NCBI-GeneID:
9624120
NCBI-ProteinID:
XP_002948136
JGI:
103767
UniProt:
D8TP16
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MPPYGSTRNLTHQFIRLRNEARKLQGIGTVAQSDKATEKLISAALGNSSDVEAPGPSTSS
SVAPVWVQQSERIRQELKVLKERIAKLREYHRKALLVTFDGENEAQVHAETLTREVQQSF
KRLDAAIRIVGETTGPNDDAEIRKQVQQQLAQALFKLSLEFRREETRFLNKVEEHKGMEK
GSSIGVIAEEEGTWTGGELMDPGFTQAQMAMVDISTNLVNERDTEIRKIVETIAELAQIM
KDLATLVIEQGTMLDRIDQNVTQTAVKVEEGVKQLKAAETTQKRGRMFMCIIALICIIVL
LLIIVIIRHA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctccatatggctcaacccgcaatttgacacatcagtttatacgactaagaaatgag
gcacgcaagcttcagggtattggaacggttgcgcagagcgacaaggccacggagaagttg
attagtgcggcgttggggaattcatccgacgttgaggcaccgggaccttctaccagctcg
tctgtggcaccggtttgggttcagcagtccgagcggattcggcaagagcttaaggtctta
aaggagcgtattgcgaagctgagagagtaccatcgtaaagcccttcttgtcacattcgac
ggggaaaatgaagcgcaggttcacgcggagacgctgacccgggaggtccagcagagcttt
aagcggctagacgcagcgatccgcattgttggcgaaacgaccgggcccaacgacgatgct
gagattcggaaacaagtgcagcagcagctggcgcaggccctgttcaagctgtctttggag
ttccggcgcgaagagacgcgcttcctgaacaaggttgaggagcataaaggcatggagaag
ggttcgtccatcggcgtgatagcggaggaggagggaacgtggactggtggcgagttgatg
gacccgggcttcacgcaggctcagatggccatggtggacatttcaacaaatttggtcaat
gagcgggatacggagatccgcaagatcgtggagacgattgcggagctggcacagatcatg
aaggatctggccacgctggtgatcgagcagggaaccatgctggaccgcatcgaccaaaac
gttacgcagacagccgtcaaggtggaagagggcgtcaagcagctcaaggcggcagagacg
acgcagaagcgcgggcgcatgtttatgtgcatcatcgcactcatctgcatcatagtgctc
ttgctgatcatcgtcatcatccgccacgcataa
DBGET
integrated database retrieval system