Volvox carteri f. nagariensis: VOLCADRAFT_103834
Help
Entry
VOLCADRAFT_103834 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_103834
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
VOLCADRAFT_103834
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
VOLCADRAFT_103834
Prokaryotic type
VOLCADRAFT_103834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Na_H_antiport_2
Motif
Other DBs
NCBI-GeneID:
9624360
NCBI-ProteinID:
XP_002948364
JGI:
103834
UniProt:
D8TPI3
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MLIDAIPLAHAVMVLLRLACTVRNTGQTAVRPCAARRGHAANDYHFMVGRPCQYLVHMSL
MRILNLFCKSSVRPVLFGSCVMHPWEPQQLPVAVAGGPRVGAAASQPWTAVQAKDAVGSA
GPWHSTKSRHTGFPLRTGLALTWLGTNSGTPTLERNVSCTLVRLPGAVQMVDCGEGTHRQ
LLSLEGSLDLAEIDGIFITHLHGDHCFGLPAALAVLDRAKAAGQTDPARQRHHVYGPPGL
ALPVLISELVCSPAAAHPPQPLAQALGQQRRRRNGDERDCHGAGDSGVEVSLQRIAARRV
LDAPELAAAVQAVQSRVAALEEIWSPLPRYQPYGQHGRNSGSQNVLDSEVLELTSSADED
ADEADGGGGAGGGAGGGAPFRFVAAEGLFWELPGCAGFRVRAAQLQHRVPCWGYVFVEGR
PYEEGMRRRKVVVLGDTVSSRPIAPLAAGCDVMSHEATFARGMEAKARIAQHSTGWMAGA
FAAAVGARSLVLTHFSARYREGPRDVDLSRSSRASGQQEAEQQSWAVAGLLKEAAATYGR
PNHLFAASDFYTHHVPPRPLAASAAGLRGTVAGGDTEGLGEGSDGETASREVATGPRGRV
GPSGGHVARGRILRRAVSEGRSA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctaatagatgccatacctctagcgcatgcagttatggtccttctacggttggcatgt
acagtccgcaacacagggcaaacagcagtccgcccgtgcgccgcacgtcgagggcacgca
gccaacgattatcatttcatggtcgggcgcccatgtcagtacttagtacacatgtcactc
atgaggattctgaacctcttttgcaagtcaagcgtcaggccagtcctcttcggctcctgt
gtaatgcacccgtgggagccgcagcagctccctgtagcggtcgcaggtggcccacgggtc
ggtgccgcggcttcgcagccctggacggcggttcaggcaaaggatgcggtcggctcggca
gggccatggcacagcactaagtcccgccacacgggttttccgttgcgtactggactcgcg
ctgacgtggctagggacaaactcgggcacccctaccttggagcgcaacgtgagctgtaca
cttgtacggctgcccggtgccgtacagatggtggactgcggcgaaggcacgcaccgtcag
ctgctgtcactggagggctctttggatctggcggagattgacgggatcttcatcacgcat
ctccatggtgaccattgcttcggcctgccggcggctctagcagtgctggatcgggccaag
gcggcgggacaaaccgacccagcacggcagcggcatcacgtgtacggcccgccgggactg
gcgctgccagtactgatttcggagctggtctgctcgcccgccgcggcgcacccaccacag
ccgctggcgcaggcgttagggcagcagcggcggcggcgcaacggcgatgagcgcgactgc
catggtgctggtgacagtggcgtggaggtgtcactgcagcgaatagctgctcggcgggtg
ctggatgcgccggagctggcggctgccgtacaggccgtacagtcccgcgtcgcggccctg
gaagagatctggtctccactgccgcgctaccagccgtacggtcagcacggccgcaatagc
ggatcgcaaaatgtcttagatagcgaggttttagagctgacgagcagcgccgatgaggac
gcggacgaagctgatggtggtggcggtgctggtggcggtgctggtggtggagcgccgttt
cgttttgtcgctgccgagggccttttttgggagctgccaggctgtgcagggttccgtgtg
cgggcggcgcagctgcagcatcgggtgccttgttggggctacgtattcgtggaggggcgg
ccgtatgaggagggaatgcggcggaggaaggtggtggtgctgggcgacacggtctcctca
cggcccatcgcgccgctggccgcgggctgcgatgtaatgtcgcatgaggctacctttgcg
cgcggcatggaggccaaggcgcgcatcgcgcagcatagcacgggctggatggctggcgct
ttcgcggccgcggtgggcgcgcgcagcctggtgctgacacacttcagcgcacgataccgc
gagggaccgagggatgtggacctgagtcgctcctccagggcctcgggacagcaggaggcc
gagcagcagtcttgggccgtagcggggctcctcaaggaggctgccgccacgtatggtcgg
cccaaccaccttttcgctgcttcggacttctacacgcaccacgttccgccgcggccgctg
gcggcgtcggcagccggcctacggggcaccgtagcgggcggggatacggaggggttgggc
gaaggctcagacggggagacggcaagccgggaggttgcgacagggccccgtgggagggtg
ggcccgagcgggggccatgtggcgcgagggcggatcttgaggagggcagttagtgagggc
cgaagcgcttga
DBGET
integrated database retrieval system
