Volvox carteri f. nagariensis: VOLCADRAFT_104228
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Entry
VOLCADRAFT_104228 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
9616107
NCBI-ProteinID:
XP_002949152
JGI:
104228
UniProt:
D8TS80
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MPVVAKDTSRAAIATLQRAQHCSQLLSGEDSWQQRTPLTDKQLEDFSSLVLGSSSNVWSA
EERNVPASTSYSEHSLESLVAKFKSSQSKHGCLSALKELTRRGELELLIRGLQELSKPDQ
EAIFRRWRYQDFLDAVTRNQKAKLALQFAKLAVPNVHKPALLTMSVLKTCAKCRDLDAGM
TVLELARKHAVPIDSHMLTSLINAPSAARLLRPPPPPMAIFALHINPVCKAVGNVDKAHR
VYLDMRAGGHRIDSHVYGALIATCAEAMKRDLTVMHERKDQYVLLERAFQYVADAEAAGV
VLQAPVWNSLMVCAGRSGELNRAFEVLTMMQQRGISASATTYGSLIESCVCARQPEKALR
VFEVALQKGFQSEVKIYTQALSACMLPLPHAWERAQDIYPAMQRASVRADKKFFACLMAV
AGRCGRLDTSFELLTEMAAEGIRPSATTISAIIYACLERGNLALARRVYDLGARQKVYPV
LSQFNRMMDVYASECRFGEVVSLLSDMVAAGRSPNLNTYRIIINACAFTDQAGLAFQVFA
LMHANKVQILQLSVAQAIYYMLIKACLSQTRFMWVPTGYPPSEPPVGSPAAAVAMAPSAA
PQGHPHGRGLPAERQKEAERVLAALGAHKLRRGAHQSNPFDGPPDTIDWASHALSAFHHM
LSRGFRPTLELLDCLLNCMRAMMLPAGEPGSPEATPKYVSPFVPLRSRNEVFEVAFEPRA
FAILDEAIAKGLVPSYDPEAPMVVDMRNMPPVVAEVYVLHVLLTLERRARRRQQQAADSA
EAPGAGSYHHSITLLVPPFDPDLVKWPSYVDRVMNRYTATMAAEERARLRHRSEYRRARA
RRRRRRIAAEKAAAEAAAAADGAVDDADGSYSDSDSAFGPLGGVASSSYDELEAVISGSE
DDVPGAAHHDPWLREEETALGGGSENGNGTQDAAATSGSSGDLYVADSTTGLAVAATLQR
MKVWMDMDYVNGTITVFAVEVTRWLKRRRQAAEAASSAAAASAGGSVGIAAGAGGSRSSG
TDGAGGVDGGLSSSGGGLGSPAAGRGAAAMGMMAGSLAGALTSARMMGVGGMRSRGNPVE
QQQRNIRLGMAAAGGSSSGGGGSVGRGASAASGPSHGPMSQQQQQQHLAHAASTNGNGAT
MSGRPQAQSQQGNRSPGNGSESAPRARPPSSARNANRPLPLPLTNGVKDSRQRAGATAVS
TTAAARTEPSASAHLWRLQDTTAMPPSANYHMTSGADGHALNGAGSNGDAHHATTAATAP
HQKHPHQRWRNRTMRGADVEGSLCPIGNKEVQVAGVQGCRSSMFFGTDQLSKDSASMVQC
LVVRHAWCIFGCEAFSVFLFLYGDRWVHDLRTWVSGLTGILDF
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttgccaaggacacctcgcgtgcggccattgcaacgttgcaacgagcgcaa
cattgctcacagcttctttctggggaggattcatggcagcagaggacacctttaacggat
aaacagctggaggatttcagctcgctagtattgggcagcagctcaaacgtctggagcgca
gaggagcgaaatgtgcctgcttcaacaagctatagcgagcactctttagaatctctggtt
gccaagttcaagagttcccaaagcaagcatggctgtttaagtgccttgaaagaattaacc
aggcgaggcgaacttgaacttctgattcgtggcttgcaagaactcagcaagccggaccag
gaggccattttccgaaggtggcgctatcaggactttctcgacgctgtgacacgaaaccag
aaggccaaactagcattgcaatttgcaaagctcgctgttccgaacgtgcataagccggcc
cttcttactatgtccgtgttgaagacatgcgccaagtgccgcgaccttgatgctgggatg
acggtgttggagttggcgcgcaagcacgccgtgcctatagacagccacatgctgacctcc
ttaataaacgctccatctgccgctcgcctcttacgccctcccccccccccaatggcaatt
ttcgcacttcacatcaacccagtctgcaaagccgtgggcaatgtggacaaggcccaccga
gtgtacctggatatgcgcgccgggggccaccgcatcgacagccacgtatatggcgcactg
attgccacatgtgcggaggctatgaagcgcgatctcacggtcatgcacgagcggaaggat
cagtacgtgctactcgagcgtgcgttccagtacgtggcggacgcggaggcggcgggggtg
gtgctgcaggcacccgtgtggaactcgctcatggtgtgcgcgggacgcagcggcgagctg
aaccgcgcgttcgaggtgttgacaatgatgcagcagcgcggcatcagcgccagtgccact
acgtatggctcgctgattgagtcgtgcgtgtgtgcgcgccagccggaaaaggcgctgcgg
gtgttcgaggtggcgctgcagaagggctttcagtccgaggtgaagatctacacacaggcg
ctgtcggcgtgcatgttgccgctgccgcacgcctgggagcgcgcccaggacatttacccg
gcaatgcagcgcgcatcggtgcgcgccgacaagaagtttttcgcgtgcctcatggcggtt
gcgggccgctgcggccgcctagatacctcgttcgagctgctcactgagatggcggccgag
ggcattcggccctccgcaaccaccatctcggccatcatctacgcctgcctggagcgtggc
aacctggccttggcacgacgcgtgtacgatctgggcgcacggcagaaggtgtacccggtg
ctgtcgcagttcaatcgcatgatggacgtgtacgccagcgagtgcagatttggcgaggtg
gtcagtctgctgagcgacatggttgccgccggtcgcagccccaatctgaacacctaccgc
atcatcatcaacgcctgcgccttcacggaccaggcgggcctggcgttccaggtctttgcg
ctcatgcatgcgaacaaggtgcagatcctgcagctcagcgtcgcgcaggctatctactac
atgctcatcaaggcctgtcttagtcagacgcgctttatgtgggtgcccactggctacccg
ccatcggagccgccggtcggctcgcctgcggctgcagtggcgatggcgccgtctgcagcg
ccgcaggggcaccctcacggccgggggctgccagctgagcggcagaaggaagcggagcgg
gtgctagcggcgctgggggcgcacaagctacgtcgtggtgcccatcagagcaaccccttt
gacggaccgcctgacacgatagattgggccagccacgcgctcagcgccttccaccacatg
ctcagccggggattccggcccacactggagctcctggattgtctgctgaactgcatgcgc
gccatgatgctgccggcgggggagcccgggagcccggaggccacgcccaagtatgtctcg
ccattcgtcccgttgcgttcccgcaacgaggtcttcgaggtggcgtttgagcccagagca
ttcgctatactggatgaggccatcgccaagggcctggtgccgtcctacgacccggaagcc
ccgatggtggtggacatgcgcaacatgccgcccgtggtggcggaggtctacgtgctgcac
gtgctgctaacgctggagcgccgtgcgcggcgacggcagcagcaggctgcggactctgca
gaggcaccaggcgctggctcctaccaccactccatcacgctgctagtgccaccatttgat
cccgacctggtcaaatggccgtcgtacgtggacagggtgatgaaccgctatacggcaacg
atggcagctgaagaacgcgcgaggttgcggcatcgtagcgagtaccgccgtgcacgtgcc
cgccggcggcggcggcgcatcgctgctgagaaggccgccgcggaagcggctgccgcagcg
gatggtgccgttgacgacgctgacggctcctactcggactctgattcggctttcggtccg
ctgggtggcgtcgctagcagcagctacgacgagctcgaggccgtcatcagcggcagtgag
gacgatgtcccgggcgcggcgcaccacgatccttggctccgcgaagaggaaacagctctg
ggcggcggcagcgagaacggcaacggcacgcaagatgccgctgccacctccggcagcagc
ggcgacctgtacgtggcggatagcacgacaggcctggcggtggctgcgacactgcagcgg
atgaaggtctggatggacatggactacgtcaacggcaccattacagtgtttgcggtggag
gtgacacgttggctgaagcggcggcgccaggcggcagaagccgcgtcgtcggcggcagcc
gcttctgcaggtggcagcgttggcattgccgccggtgctggcgggagccgcagcagcggc
accgatggtgctggtggtgtcgacggcgggctgtcatcgtctggcggtggcttgggctcg
ccagcggctgggaggggggcggcggccatgggcatgatggcgggtagcctggcgggggcg
ctgaccagtgcacgaatgatgggggttggcggcatgcggagtcgcggcaaccctgtggag
cagcagcagcgaaacatccgtctgggcatggcggccgccggtggcagcagcagcggcggg
ggcggatccgtgggtcgtggggccagcgcagcctccgggcccagccatggcccaatgtcg
cagcagcaacagcagcagcatctcgcgcatgcggcgtcgaccaatggcaacggggccacg
atgtcgggacggccacaggcacaatcgcagcagggcaaccgcagccccggcaacggcagt
gagagtgccccacgggcccgaccgccgagctctgcgcggaatgccaaccggccgctgccg
cttcctctgacgaacggggtgaaggattcccggcagcgcgccggcgcaacagcagtatct
actaccgcggcagcgcgcacggaaccgtcagcgtcagcgcacttgtggcggctccaggac
accacggcgatgccgccctctgcaaactaccacatgacgtccggcgcagatggccatgca
ttgaacggtgctggaagtaacggcgatgcgcaccatgccaccaccgcggcgactgctcct
caccagaagcatccgcatcagcgctggcgcaataggacaatgcgtggtgcggacgtggag
ggttccttgtgtccgatcggaaacaaggaggtgcaggttgcaggtgtgcagggttgcagg
tcgtccatgttctttggaacagaccagctgtccaaagacagtgcctctatggttcaatgc
ttggttgtgcgacatgcgtggtgtatttttggctgcgaagcgttttccgtgttccttttt
ttatatggggataggtgggtccatgacttgaggacctgggttagtggcctcactggtatt
ttggatttttga
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