KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_104320
Entry
VOLCADRAFT_104320 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_104320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_104320
Spliceosome [BR:vcn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    VOLCADRAFT_104320
 Complex B
    VOLCADRAFT_104320
 Complex C
   U2 SnRNP specific factors
    VOLCADRAFT_104320
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DHU1_N LRR_LRWD1 LRR_NXF1-5 LRR_R13L1-DRL21 Gal11_ABD1
Other DBs
NCBI-GeneID: 9618703
NCBI-ProteinID: XP_002949532
JGI: 104320
UniProt: D8TSW2
LinkDB
Position
Unknown
AA seq 313 aa
MEARPAAGVGPRLPGRITAELIMRSPQYMSCIKQYEVDLRGNKIAAIENLGATQNQFDSI
DLSDNAIVRLDGFPKLLRLKQLLMNNNRVARIARGLEEFIPNLDTLILTNNRINNLQDID
PLATLLKLEHLSLHGNPVMTKANYRLYVISKLPRLKVLDFKKVKQKERDAAKAMFSSEEA
QATHASKTFEPDEDLAAAQQQAGVVLPRENGGEQQRPEEDGQGDGDDEAAKATAAPSQEQ
LIAIKAAIANAQTLEEIQRLEEALKTGHLPSEIRVDGVSGKEAVAAAPAEAATGMEVDAN
GGAGNHLEGMDVS
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggcgcgaccagcggccggggttggcccccggctgccggggcgcattacggcagag
cttattatgagaagtcctcagtacatgagctgcataaaacagtatgaagttgaccttcgc
ggcaacaagattgctgctatagagaaccttggagcgacgcagaaccagtttgacagcatc
gacctctcggacaacgctatcgtgcggcttgatggcttcccaaagcttctgcgactcaag
cagttgctcatgaataacaaccgcgtcgcgaggatagcacgagggctcgaagagttcatc
ccaaacctggatactctaatcctgaccaataatcgaataaataacttgcaggacattgac
ccgctcgccacgctgctaaagctggagcacctgtcgttgcacgggaacccggtcatgacg
aaagccaactacaggctgtacgtcatcagcaaactgccacgattaaaagtcctggacttc
aagaaggttaagcaaaaggagcgcgacgcggcgaaggccatgttctcctcggaggaagct
caggccacgcatgcatccaaaacttttgagccggatgaggacttggcggctgcgcagcaa
caggcaggcgtggtgctgccacgggaaaatggcggcgagcagcagcggccggaagaggat
gggcaaggtgatggcgatgacgaagcggcgaaagctacggcggcaccgtcgcaggagcag
ctcatagccatcaaggccgctattgcgaatgcgcagacactggaggagattcaacgactg
gaggaggcgctgaagacggggcatctgccgtctgaaattcgtgtggatggggttagtggg
aaagaggcggtggcggctgcaccagcagaggcagccacgggaatggaggtggatgccaac
ggcggtgcgggaaaccacctggagggcatggatgttagctga

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