Volvox carteri f. nagariensis: VOLCADRAFT_104541
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Entry
VOLCADRAFT_104541 CDS
T01330
Symbol
met1
Name
(RefSeq) maintenance DNA methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00270
Cysteine and methionine metabolism
vcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VOLCADRAFT_104541 (met1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_104541 (met1)
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_104541 (met1)
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_104541 (met1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vcn02048
]
VOLCADRAFT_104541 (met1)
Enzymes [BR:
vcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
VOLCADRAFT_104541 (met1)
Transcription factors [BR:
vcn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
VOLCADRAFT_104541 (met1)
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
VOLCADRAFT_104541 (met1)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VOLCADRAFT_104541 (met1)
Prokaryotic defense system [BR:
vcn02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
VOLCADRAFT_104541 (met1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
DNMT1-RFD
Motif
Other DBs
NCBI-GeneID:
9619075
NCBI-ProteinID:
XP_002949905
JGI:
104541
UniProt:
D8TUB2
LinkDB
All DBs
Position
Unknown
AA seq
2277 aa
AA seq
DB search
MIHVSFDGLAILKFSGTLVTKNLKEFPKLATDGNGPAKAKTSEKGTKRRADNGNDAAAAA
VLTFSAEPSGPSSTGNQNPHHAQSALDSAAAAGSAPTAGGRAAADIGAEAAAVAEVKHLT
GSAEAPEAAGPKGKKQKVAATYPATAGAATAANGKPNADRPAVASVAKAVQKSTAASKAA
AAEAATTGHGNKQQQGKDKKLTTPAGMEGQAADDGDDGYDSKADAGGSKARRNGSTVRRA
VQRVKSYKESGNEDDEDQEEADETAKVKDAVTEEDALQSTGPPAAAVAATTGAAAGLMRS
LLGFSLVDAEGRPEPLDRLGSLQGGGLFITAAAAAASVSLCRVTRVGPVLGWRIKYSVAA
DPRLVLHTALAHYECAKPAASYRKLLEPLLAQVELAGAVHQALCTETGGRLDSTFEDVCC
RVARTKVSKQYGGARYALKLNGRFILEQLAAMAGTAGSHIVVGADNGGKDKQPADNSKAA
AAAAADKYSYDNGPFARGLRQALETEDHMPLSKDALAMIMGRGGGGGGGGGIRIATDGGG
GRDAETGGDGGGGGGGGGGTTVDDDYEMACRLMAEEYAEHMNGGRYVPPLRGVGRRRRGA
GSKAAGGGCSNSKEPYIQVREEEIADDYPEPKEYKGEEDQDEWDELILEDPELLGCGFHG
ADERDSSRTLDHFAIYNSDVRGMARMGHVWGHGFLTTLELVPMVAGLDANVNIFASGVLA
EDTGDWGPAAAPEAVDAEASGCGSGAGGSGSGGSASCGGQRYFLTQIREWFVECGPEGQV
VINIRTDVSWYRLLRPQKRYAPWFRVVQRAANVAVQILKWLDEQDRAARLYFPDVITRLS
SLAPGHEAYIRAKVEAVERFVVVHGQVVLNLIGRHYKDAIRRCGFGKALRVKLGERRHRK
LGKPSAAGGARRGGRGATAAAGGAGSGMAAAKENPVKLRQVRKAKKPEPMPATSTAQVRR
IWSDYFTALDEIQRKQQLKKEQELQQQNGDQQQLQEEKEQKMDVDSEPAAGAPAAPAPAP
VHAAPVAAAESAAGVFRLPKILSKSWVLTERRTVDEATGRTMYGAATCGDLKLTPGSIIR
LGIVPQLLGGRRCRRRVAAAASDGSDDDEGDGASEGDTAESDDGGEKDSSGGGGGTGGTD
AAAAAAAASARRWAVLTEGPFGLVQCIFTDKEYKEGGAVSPTRDSRFLLLTSFNVFQLLL
PPWKGRVGRGRQGFQLGDSVAPGVSAFPFPLRLLQSPALSRGGGSGGATASAGGGLAAAP
GDVVVLPLNGRTVADVVESKFLSRSAKHISRLEDSKSDLERVHQDAERVAAGRPPVFVYR
SVYCPLQGMFRELRLRDLGLGSYVQEAPRPATLELLPGGAGFIKDGVTYQVGDFLYLRAA
ALDEEEEEEESDSEDKEQDTGSDSCSGTDDPNSDSEDNDSDSEDNDEEEEGGSSSSEGED
DDDDDDGGEGVDEDVRDAARRNPRRAAADATAARGRKRASKGKEKQKQRAKARETKNAKQ
KQGMKTNRSNNNGNTSTNQIAAAAAAGAAPPRRKRATTHKGSNNGLRAFAVAMLWSVEVE
VEVKVTNKGNNKNNPRTAGDAAGAGVKGKKEAMASAAEAVAPFTIQVRRFYRPEDVSPDV
AYRAGWWDLYMPPLSEGTEETGAMLELSVEEVYGKCDVVLGQPRPKSRYLRVSVCVFDPV
LDTFQVVGSYDPRQPGATPGPPPARLPTPPLPAPRQQQYGIGAKVNGGRAREEDGRGDGE
EDVEAAVHEDGGEGIQLDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNP
DAKVFCNNCNVLLRAAMLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGP
PCQGYSGMNRFNKGLWSQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVV
RTLLDLGYQVRFGILNAGHFGVPQSRKRTFIWAALPGEVLPEWPTPRHVFVATQLGVRMG
GNAAAAAGGSCGGRKGGKGADGVKNGGRGGGAGGGGGGDIAGGSLAPPGGFFFASGTPLP
GAPLRTVTVRDAIGDLPPIDNDAKTDVLPYTAVPTSAFQRAIRGSAGSELRDHMVKQMNE
LNLERCRCIPRGVPGADWRVLLKIVAEDPSREFFKGESLVPFCLPNTADRHNGWRGLYGR
LDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNVICRHRQV
GNAVPPPLARALGQQLRLALKEGRARDTKEAAEKIQSMRARRQQQPQQQPQQQHKHK
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atgattcatgtcagtttcgatggccttgctatcctaaaattttccggtactcttgtaacg
aaaaacttgaaggaattcccgaaattggctaccgatggcaacggtcccgccaaagccaaa
acatcggagaaaggcaccaagcgccgcgcggataacggcaacgatgctgcagctgctgct
gttctcacgttctcagcagagccctccggtccctcttcgacgggaaatcaaaatccacac
catgctcaatcagcgcttgacagtgctgcagccgctggctctgctcccaccgctggcggc
agggccgccgccgacattggcgctgaggccgccgctgtggcggaggtgaagcacctcacg
ggctcggctgaggcgccggaggcggccggacccaagggtaagaagcaaaaggttgctgca
acttaccccgccaccgctggtgctgcaacagccgccaacggcaagccaaacgcggatagg
ccagcagtggcatcagtagcgaaggcggttcaaaagtctacggcagcaagcaaagcagca
gcggcggaagccgcaacaaccggtcatggcaacaagcagcagcagggcaaggacaagaaa
ctaacaacaccagcaggaatggaagggcaggcggccgatgacggtgatgatggctatgac
agcaaagcggatgccggcggcagtaaagcacgtcgtaatggcagtacagtccgtagagca
gtccagagagtgaagagctacaaggaatcagggaacgaggatgacgaggaccaggaggag
gcagacgagactgctaaagtaaaggacgctgttaccgaggaggatgcgcttcaatcgaca
gggcccccggcggcagcggtggcagcgacaacgggtgctgcggcaggcctcatgcggagt
ctgttgggcttctctctggtggatgccgaggggcggcccgagcccctggacagactgggt
agtttgcagggcggaggactattcataacagcagcagcagcagcagcttccgtaagcttg
tgtcgggttacccgagttgggccggtccttgggtggcgcatcaagtactcggtcgctgca
gatccacggttggtattgcacaccgcgctggctcattacgaatgcgccaagccggcagcg
tcctaccgaaaactgctggagcctctgctggcccaggtggagctggcgggtgccgtacat
caggcgctgtgtacggagacgggcgggcgattggattcgacgttcgaggacgtttgctgt
cgggtggcgcgaaccaaggtgtccaagcagtacggcggagcccgctacgcactgaagctc
aacgggcgtttcatactcgaacagcttgcggcaatggcgggaactgccgggtctcacatc
gtcgtcggagcagacaacggcgggaaggacaagcagccggcggacaacagcaaagctgcg
gctgctgccgcagctgacaagtactcgtacgacaatgggccctttgcacgtggcctacgt
caggcgctggaaaccgaggaccacatgccgctctccaaagacgccctggcgatgatcatg
ggtcgtggaggaggaggaggaggaggtggaggcattcgtatcgcgacggacggcggcggc
ggccgcgatgccgagacaggcggtgacggcggaggtggtggcggtggcggtggcggtacg
acagtcgatgatgattacgagatggcatgccggctgatggctgaggaatacgcggagcac
atgaatggtggcaggtatgttccgccgttgcgcggggtcgggcgccggcggcgcggggct
ggctctaaggcggctggcggcggctgcagtaacagcaaggagccgtacattcaagtacgg
gaagaagagattgcagatgactacccggagcccaaagagtacaagggcgaggaggaccag
gacgaatgggacgagctgattctggaggatccggagctgctgggttgcggttttcatggc
gcggacgaacgcgacagcagccgtacgttggatcatttcgccatctacaactccgatgtg
cgggggatggcgcgtatgggacatgtgtggggacatggattcctgaccaccctggagctg
gtgcccatggtggcgggcctggatgccaacgtcaacatctttgccagcggcgtgctcgcg
gaagacacgggagactgggggcccgcagctgcgcctgaggcagttgatgctgaggcgtcg
ggctgcggttccggagctggtggatccggatccgggggatctgcttcctgtggtggtcaa
cggtatttcttgacccagatccgggaatggtttgtggagtgcggtccggagggccaggta
gtgatcaacattcgtacggacgtgtcgtggtaccgcctcctgaggccccagaagcgctac
gcgccgtggttccgtgtcgtacagcgcgctgccaacgttgccgtacagatcctcaaatgg
ttggacgagcaagatcgtgcagcacgtctttacttccccgatgtgatcacccgtttgtcc
tctcttgccccgggacacgaggcgtacatcagggccaaggtggaagcagtggaacgcttc
gtggtggtgcatggccaggtggtcctcaacctcataggccgccactacaaagacgccatt
cgtcgctgtggatttggaaaggccctgagagtcaagctgggagagcgacgacaccgcaaa
ctggggaagccttccgcggcgggtggggcgcgcaggggaggcagaggagcgacagcggct
gcgggtggggcgggctctgggatggcggctgcgaaggagaaccctgtcaagctccgccaa
gtccgtaaggccaagaagcccgagcccatgccggccacgtccacagcacaggttcgccgt
atctggtcggactatttcaccgctttggacgagattcaaaggaagcagcagctcaagaag
gaacaggagctgcagcagcagaacggcgaccaacagcagctgcaggaagagaaggagcag
aagatggatgtggacagcgagcccgcggcgggagcaccagcagcaccagcaccagcacca
gtgcatgctgctcctgtggcagcagcggagtcggcagcaggggttttccggctcccaaag
attctgtccaagtcatgggtgctgacagagcgccggacggtggacgaggccacaggccgt
acgatgtacggcgcagctacatgtggcgatcttaaactgaccccagggtcgattatccgc
ctcggtatagtcccgcagctgcttggcggccgccgctgccgccgtcgtgtggccgctgcc
gcctccgacggcagtgatgacgacgagggtgatggtgccagcgaaggcgacaccgcagag
tccgatgacggaggcgaaaaggactccagtggcggcggcggcggcacaggcggtacggat
gctgcggcagcggccgcagcggcgtcggcacgccgttgggcggttctgaccgaaggcccg
tttggccttgtccagtgcatcttcacggacaaggagtacaaggagggaggagctgtgagc
cccacacgcgactccagattcctgttgttgacttctttcaacgttttccagttgcttctt
ccgccatggaaggggcgtgtgggtcgagggcgacagggctttcaattgggggactctgtt
gcccccggcgtgtcagcattccctttccctctccgcctccttcaatcgcctgctctaagc
cgggggggcggcagcggaggcgctacagctagcgccggcggcggcctggcggcggcaccg
ggtgatgtggtggtgctgccgctcaacggtcgtacagtggcggacgtggtggagtctaag
ttcctgagccggtccgcgaaacacatcagccggctggaggatagcaagtctgatttggag
cgggttcatcaggacgcggaacgtgtggcggcaggtcgtccccccgtcttcgtgtaccgc
agtgtgtactgcccactccaggggatgttcagggagctacggctccgagatctgggccta
gggtcgtacgtgcaggaggccccccgacctgccaccctggagctgctgcccgggggtgcg
ggcttcatcaaggacggcgtcacgtatcaggtcggcgactttttgtacctccgcgcggct
gccttggacgaggaggaggaggaggaggagagcgacagcgaggacaaggagcaggatacg
ggatcagacagctgctccggaacagacgatccgaattcggattccgaggacaacgactcg
gattcagaggataatgacgaggaggaggagggcggcagcagcagcagcgaaggcgaggat
gatgatgacgatgatgatggcggcgagggagtggacgaggacgttcgcgatgcggctcgg
cggaacccgcgccgcgcggctgctgatgcgactgcagcgcggggacgaaagcgagctagc
aagggcaaggagaagcagaagcagcgtgcgaaggcgagggagacgaaaaacgcgaagcaa
aagcaagggatgaagacgaacaggtccaacaacaacggaaacactagcaccaatcagatc
gcagcagcagcagcagcaggggcagcaccgccacgtcggaagcgggcaaccacacacaag
ggcagcaacaacggtcttcgggcctttgcggtggctatgctgtggtcagtggaggtggag
gtggaggtgaaggtaaccaacaaggggaacaacaagaacaaccccaggacagcaggggac
gcggctggggccggtgtcaagggcaagaaggaggcgatggcgtcggccgcggaggcggtt
gctccgttcactattcaggtccgccgcttttaccggcctgaggacgtgtccccggatgtg
gcttaccgagctggctggtgggacctctacatgccgccgctgtcggagggaacggaggag
accggagcgatgctagagctgtccgtggaggaggtatacggcaaatgtgacgtcgttttg
ggccagccacgaccgaagagtaggtacctgcgagtgtctgtgtgtgtgtttgatcctgtt
ctggatacgttccaagtggttgggtcgtacgaccctcgccagcccggcgccacacccggg
cccccgccagcccgtctcccgacaccgccactgccagcaccgcgccagcagcagtacggc
attggcgccaaggtcaatggtggcagggcgcgggaggaggatggaaggggggacggggag
gaggacgtagaggcggcagttcacgaagatggcggcgagggtattcagttggacacgctg
gacatctttgccgggtgtggcggactgagcgagggtatgcaccaggccggcgtggctcgt
actcgctgggccatcgagtacgacagtgaggcagccgaggcatataagctcaataacccg
gatgccaaggtcttttgcaacaactgcaacgtactgctgcgggccgccatgctcaaggcc
gggtttgaggcggattgcctggctgaccccacgtgtgtggaggcggctgccggactggac
gccgccaccctgggcgacctgccgacccctgggtcggtcgccctcatgatgggcgggccg
ccctgccagggctactcgggcatgaaccggttcaacaaggggctctggtctcaagtgcag
aacagcatggtcatggcgtatttgtcgtactgcgatttctaccgcccgcggtactttttg
ctggagaacgtgcgcaactttgcggtgtaccgcggtggggaggtgtttcgacttgtcgta
cggacgctgctggatctcggttaccaggtgcggttcggtattctcaacgctggccacttc
ggcgtccctcagtcccgcaagcgcaccttcatctgggctgccctccctggagaagtccta
cccgagtggccgacaccaagacatgtctttgtggcgacacagctgggagtgaggatgggt
ggcaatgcggccgctgctgcagggggcagctgcggcggacggaagggaggcaagggcgca
gacggcgtgaagaacggcggtagaggtggaggtgcaggtggaggtggaggtggggatatc
gcagggggttctttggcgcccccggggggtttcttctttgcttcggggacgccgctgccc
ggagcacccctgcggacggtgacggtgcgggacgcgatcggagacctgccgccaatcgac
aacgacgccaagacggacgtgttgccgtacacagccgtgccaacgagcgccttccagcgg
gctattcgcggctcggcgggttctgagctccgagaccacatggtaaagcaaatgaacgag
ctcaacctggagcgatgcagatgtataccccggggggtgccgggtgccgactggcgtgta
ttgctcaagattgtggctgaggacccctccagggaattcttcaagggcgagtcgctggtt
cctttctgtctgcctaacacggctgacaggcacaacggctggcgggggctgtacggcagg
ttggacccctacggccacttccccacagccaccactgagcccaaccccatgggcaaggtg
ggtcaggtgttccaccccgaccaggacagaatcgtgtcggtgagggagtgcgccaggagc
cagggttttcctgaccacttccgattctacggtaacgtgatctgccgccatcgtcaggtg
ggcaatgcggtgccgccaccgctcgctcgggccctcggacagcagctgcgtctcgccctc
aaggagggccgagctcgcgatacgaaggaggccgctgagaaaatccaatcgatgcgagcc
cgccggcagcagcagccacagcagcagccacagcagcaacacaagcataagtag
DBGET
integrated database retrieval system
