Volvox carteri f. nagariensis: VOLCADRAFT_104736
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Entry
VOLCADRAFT_104736 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_104736
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_104736
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
VOLCADRAFT_104736
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
VOLCADRAFT_104736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
9617721
NCBI-ProteinID:
XP_002950494
JGI:
104736
UniProt:
D8TVR3
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MYVCTGLRARIHHENVNPFGHVSLSAVHDSLLWSDGLTQGYSLGAWGSRYPLQSLDLSAN
GTLRKQRRNPCRKSVRMENCAQMGKNEAAVVVTRWLRCMLVLSPEPAIDVTEKGWPRRLY
APRPQMSGHRGFPAAVDVAAMQGQERHDDMTAMAPKKRAGNRLNRTGPGGRLGRPPRYGH
GPGFGGPAPPRGPFEPDMMHGPGGPAPPAAVGPLPDEPIMLQEVVLSKRLAGVLIGTGGS
NVSLVRRESRCKVHVSEVRGPEQTQTVELTGTEKQISNAVASIRRILTEFDPEHKVDIKP
TVETTVEIYPEMVGSVLGKAGATIKVIRQKSGAHVRVEDLQPGERMQLVMIHGSIEQVKT
AYAEVKGIIDRFDPAKVKGGFAAPMMPPPRSMMPPPGPAGPGGRYGPPGPEDRYGPPGPD
PRGRGPPAPEWYDDGYEYPPNDGPYGPMGRMDGARAPGPRGAGGPYGPMRGSPPPGAGGR
YGATGPDMGPGGPRGPGFGGGAEGPYRGPNGGPEPYGSGPVGDPRMGPGGSGGPPQPQPA
PAQPVYQPAAQTYVQPQPAPAQPQPQAAQTAAAVQTGAQQQVGPVVLMLQPDGTYKPAQV
VLYNMSAAQTGQMPAAQAVQAQQQAAQPAVQQVTIPAQAATTQAQTVSVAQPVAAATASA
PTGQVVYSTNGAVFDAGTLNQLSSSITAYSQHTAQHPQHDSQTAVGGATGAPAAANPQAQ
ATSAAAPAATATAPVTYGVYGAQQAAQPQQQQQAVPQQQAQAPAQAQQAAAVTAATAAYG
AYGQTMASTSLYPGMVGVPGGYTMTQEQMQAYMRGQFATQQQQAVHQSYNPYAYPYMYAQ
AQQTQQKPGQVEATPGATAQGAATQAGQQTVQQPVKTEQGQGQQTTVQPSHAQGQLPQYS
YQYNTGA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtatgcaccggactaagggcgagaatccaccacgaaaacgtaaatcccttcgga
catgtatcgctcagtgcagtgcacgacagtctgttgtggtccgatggccttacccagggg
tattcccttggggcctggggctcgcggtatcccttgcaatccctggatctgtcggccaac
ggaaccctacggaaacagaggagaaacccttgtcgaaagtcggtccggatggagaactgc
gcccaaatgggcaagaatgaggctgctgtggtggtaacccggtggctgcggtgcatgctg
gtgctgagccccgaacccgcgatcgatgtcactgagaaaggttggccaagacgtttatac
gcgcctcgcccgcagatgtcgggtcaccggggcttcccagcagcagtggatgtcgcggcg
atgcagggccaagaaaggcatgatgacatgacagccatggcgcctaagaaacgggcagga
aataggcttaatcgcacggggccgggcggcaggctggggcgacctcctcgttatgggcac
ggcccaggcttcggcggcccggccccccctcgcggtccatttgagcccgacatgatgcat
ggcccaggagggccagcccctccagcagcggtgggcccgcttccagatgagccaatcatg
ctgcaggaggtggtgctaagtaagcgtctcgcaggcgtgctgatcggtaccggcggcagc
aacgtatctcttgttcgccgcgagtctcgctgcaaggtgcacgtgtcagaggtccgcggg
ccggaacagacgcagaccgttgagttaaccggcacggagaagcagatttccaatgcggtt
gcctccatcagacgcattttgaccgagtttgacccagagcataaggtggatatcaagccc
actgtggaaaccacggttgagatttaccccgaaatggtcggcagcgtgttgggcaaggcc
ggcgccacgattaaggtcatccgacagaagtccggagcccacgttcgtgtagaagatctg
cagccaggagagcgcatgcaattggtgatgattcacggcagcattgagcaagtcaaaacg
gcatacgcggaggtcaagggcatcattgatcgctttgatcctgccaaggtcaaggggggt
ttcgccgcacctatgatgccgccgccgcgcagcatgatgccaccaccgggtcccgccggt
cccggtggacggtacgggccccctggacctgaggacaggtacggtcccccaggacccgac
ccacgcggtcgcggccctcccgcgcccgaatggtacgacgatggctacgagtacccacct
aacgatggcccatacggtcccatgggtcgtatggatggtgcccgtgctcccggtcctcga
ggtgctgggggtccttacggcccgatgcggggcagtccgccgcccggagctggcggccgg
tacggggcgacagggcccgacatgggtcctggtggacctcggggccctggctttggcggc
ggcgccgagggaccgtaccggggccctaatggtggtcctgagccttacgggagtggcccc
gtgggcgacccgcgcatgggccctggcggcagcggtggtccaccgcagccgcagcccgca
ccagcacagccagtgtaccagccggcggcgcagacgtatgtgcagccgcaaccggcaccg
gcgcagcctcaaccgcaggcagcacagacggccgcggcagtgcagacaggcgcgcagcag
caggttggtcccgtggtcctgatgctgcagcccgatggcacttacaagccggcgcaggtg
gtgctgtacaatatgtctgcggcgcagactggacagatgccggcggcccaggcggtgcag
gcgcagcagcaggcagcgcagccggcggtgcagcaggtcacgattccggcacaggctgcg
acgacgcaggcgcagacggtttccgtagcacagccggtggcggccgcaaccgcaagcgcg
ccgacaggacaggtggtgtacagcactaacggcgccgtctttgacgccgggaccctgaac
cagctgtcgtcgtccatcacagcctactctcagcatacggcgcagcacccgcagcacgat
tcacagaccgccgtcggcggtgccacaggtgctccagctgcggccaacccacaggcacaa
gcgacgtctgcagccgcgcccgcagccacagctacggcgcctgtgacctatggtgtgtac
ggtgctcagcaagccgcacaaccgcaacagcagcaacaggctgttccgcagcagcaagcc
caggcgccggcccaggcgcagcaggccgcagcggtgacggcggcgacggcggcgtatggt
gcgtatggccagaccatggcgtcaacttcactgtacccgggcatggtgggtgttcccggg
ggctacacgatgactcaggagcaaatgcaggcttacatgaggggccagtttgcaacgcag
cagcaacaagccgtacaccagtcgtacaacccatacgcgtatccgtacatgtatgctcag
gcgcagcaaacccagcagaagccagggcaagttgaggcgacgccaggtgcgacagcgcag
ggcgcggccactcaggcgggtcagcagacggttcagcagccagtgaagaccgagcaaggc
cagggccagcaaacgaccgtccagcctagtcatgcgcagggccagctcccacaatactcg
taccagtacaacacgggcgcgtag
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