KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105119
Entry
VOLCADRAFT_105119 CDS       T01330                                 
Symbol
spl1
Name
(RefSeq) splicing factor 3a, subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_105119 (spl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_105119 (spl1)
Spliceosome [BR:vcn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    VOLCADRAFT_105119 (spl1)
 Complex B
    VOLCADRAFT_105119 (spl1)
 Complex C
   U2 SnRNP specific factors
    VOLCADRAFT_105119 (spl1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 9615678
NCBI-ProteinID: XP_002951505
JGI: 105119
UniProt: D8TZ13
LinkDB
Position
Unknown
AA seq 898 aa
METEVENAGAIVPAGEARTVPPSTDIVVAGGVGSGSSTYIPDIEGLKKVITHTRAVGVIL
PPPDIRAIIDKTAQFVAKNGVEFEKRILSNEKNNVKFNFLVATDPYHAYYKLRIKDFSAE
DGQAPKDQAPGAPVPVAPVVPAIPAAPVSVVPKATVKPLEKPEDELYTAGEFVPVFPTRL
QKVHVPEGLTTQDLDIIKLTAQFVARNGKSFLAGLSSREHTNPQALTEPLPALFNFLKPT
HSLFAFFTALADAYSRVMMPEKGLKERLAKDSSDRAAVLDRALRRLEWERHKEKEAQDAA
DEAERERQAVQAIDWHDFVVVETITFEDDEDLELPPPLTLRDVIAMNKSREALEALNLQQ
QEAATAEGIKEADMEMDEEERAMVAEAAAQEARAAAAAAANGGVPPPPEGADGGAAPAAA
AANAAPEPASEDADAAMDMEEEEEEEEAPIKVVKNYTRQAVRTHAGRSYDPTKFVVSPIT
GELIPIEEMAEHMRISLIDPRWREQRDVMLSKIRETTKATDDEITRNLVGLAVSRPDIFG
STEEELQQAVREEIKDKMMSGVGRPVAWDGATQGGEALQNQIRAIADSRAETAERNAGAG
AGAAGSGTGPSIPQAVTLGPAARPGGGGGLGALPPPPPQGAMGMQGGMMRPPMMGGPMGM
GMGMGGAMGGPMGMMRPPMGMMGGPMGMGMGGPMGMRPPGMGMGMGMGMGMGMGGPMGMG
GPMGMGGPMGMGMGMQRPQGMAGGAAGTGAGGPPPPPPPSSATPAAPPLPREAPPLPAED
QPDAKRARVAGDFVLQPEEEFLARFPGPSRVKVLCPEVEGNEKLIGQLLEVEVASLSDSV
AEFKGRLAAVLDLPANKQKLARDGVGFMRDELSLAHYNVSPDVVLNLGLKERGGARKK
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggagaccgaagtcgagaatgcaggagctattgtgccggcgggagaggcgaggacagtg
cccccatccacggacattgtcgttgctggcggagttggcagcgggtcctcgacttacatt
ccggatattgaggggctgaagaaggtcattacgcatacgagggctgtcggtgtaattctc
ccgccgccagatatccgcgcgattattgacaagacagctcagttcgtcgctaaaaacggc
gtggagttcgagaagcgtatcctttcaaacgaaaaaaataatgttaagttcaatttcctg
gtggccacggacccctaccacgcctactacaaacttcggatcaaggacttctccgcggag
gacggccaggcgcccaaggaccaagcgccaggcgcgcccgtccccgtagcacccgtggtg
cctgcaatccccgcagcgccagttagcgtcgtccccaaagccacggtcaaaccactggag
aagcctgaggacgagctctatacggcaggcgagtttgtgcccgtgtttccaacacgtctt
caaaaggtgcacgtgcccgagggccttaccacccaggacctggacatcatcaagctcacg
gcccagttcgtggcgcgaaacggcaagagcttcctagcgggtctctccagccgggagcat
acgaacccacaggctttgacggaacccctccccgcactgttcaactttctgaagcccacc
cacagcctttttgcgttcttcaccgccttagcggatgcgtacagccgggtgatgatgccg
gagaagggcctcaaagagcggctggccaaggactcgtcggacagggccgcggtgttggac
cgggcgctgcggcggctggagtgggagcggcacaaggagaaggaggcgcaggatgcggct
gacgaagcggagcgagaacgacaggccgtccaggccatcgactggcacgacttcgtggtg
gtggagaccatcactttcgaagacgacgaggatctggagctgccacctccgctgacgctt
cgggacgtgattgccatgaacaaaagtcgcgaagcgctggaggctctcaatctgcagcag
caggaggcggcgacggccgaaggcatcaaggaagcggatatggagatggacgaggaggag
agggcgatggtggcggaagcagccgcgcaggaagcgcgtgctgccgctgcggccgccgcc
aacggcggtgttccgccgccgccggaaggcgccgacggtggcgccgcaccagccgcggcc
gctgccaacgccgctccggaaccggcctctgaggacgccgatgccgcgatggacatggag
gaagaggaggaggaggaggaagcgcctatcaaggttgttaagaactacactcgccaggcg
gtgcggacgcatgccggcaggtcctacgaccccaccaagtttgtcgtgtcgcccatcaca
ggcgagctcattcccattgaggagatggccgagcacatgcgcatcagtctcattgacccc
cgctggagggagcagcgagacgtcatgctctcgaagatcagggaaaccaccaaggcaacg
gatgacgagatcactcgcaacctcgtggggctcgcggtgtcgcgacccgatatctttgga
tccacagaggaagaactacagcaggcggtgcgcgaggagatcaaagacaagatgatgtct
ggagtgggacggcctgtggcctgggacggagccacgcaaggcggcgaggcgctacaaaac
cagattcgcgccatcgcagatagcagggcggagacggcggagcgcaacgccggtgccggc
gccggcgcagcgggttcaggaaccgggccctctatcccgcaagccgtaacgctaggcccc
gccgcacggcccggtggcggcggcgggctgggagcgcttccgccgccgccgccgcagggg
gccatgggcatgcaaggtggcatgatgcggcctccgatgatgggagggcccatgggcatg
ggcatgggcatgggaggcgccatggggggtcctatgggcatgatgcggccaccgatgggc
atgatgggagggcccatgggcatgggcatggggggcccgatgggcatgcgcccaccgggc
atgggaatgggcatggggatgggcatggggatgggaatgggcggaccgatggggatgggc
ggccccatgggaatgggcgggccgatggggatggggatgggcatgcagaggccgcagggt
atggctggcggagccgccggaactggcgccggcggaccgccaccgccgccgccgccttct
tcagcgacaccggctgcgccgcctctgccgcgcgaggcgccgccattgccggctgaggat
cagcccgatgcgaaacgcgcccgcgtcgctggtgatttcgttcttcagccggaggaggag
ttcctggctcgtttccctgggcccagccgcgtcaaggtgctgtgtccagaggtcgagggc
aacgagaagctcatcgggcagctgctggaagtggaggtagcgtcgctgtcagattccgtg
gcggagttcaaggggcggctggcggccgtgctggacctgcccgccaacaaacagaagctc
gcgcgcgacggcgtgggcttcatgcgcgacgagttgtcgctcgcacattacaatgtgtcg
ccggatgtggtcctgaacctgggtctcaaggaacgtggtggcgcgcgcaagaagtag

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