KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105243
Entry
VOLCADRAFT_105243 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03030  DNA replication
vcn03082  ATP-dependent chromatin remodeling
vcn03410  Base excision repair
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VOLCADRAFT_105243
   03410 Base excision repair
    VOLCADRAFT_105243
   03420 Nucleotide excision repair
    VOLCADRAFT_105243
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_105243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_105243
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_105243
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_105243
Enzymes [BR:vcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VOLCADRAFT_105243
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    VOLCADRAFT_105243
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    VOLCADRAFT_105243
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      VOLCADRAFT_105243
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone Bromo_TP Sec1 CENP-T_C DUF6261 TAFII28 MLTR_LBD Importin_rep_6
Other DBs
NCBI-GeneID: 9615821
NCBI-ProteinID: XP_002951737
JGI: 105243
UniProt: D8TZI6
LinkDB
Position
Unknown
AA seq 249 aa
MDTSATEKPETDVDVPRALIKRIVKAKLSALAEDESKDFGISKDALTALSESTKVFISLI
ASTANDICQEKRRSTVNADDVFNALQDLDFSELVAPLKEQLEAFKEAVKERNKNRPSKKR
KNTVDAQVAVPRNLKQQQYMAQHQNQHAAVAAAPADADADAVGGVGEVLDGGHGSVVDAG
GEPDELQHDAAALDADVTADVLGGPADDDGLGGLGMGMGLGLVDSDPTCLGDPSDVGVEV
EDMLVDAPP
NT seq 750 nt   +upstreamnt  +downstreamnt
atggacacttccgcaacggaaaagccagaaacggatgtcgacgtgccaagggctctcatc
aagcgcatcgttaaggcgaagctatccgccctggctgaggacgagagcaaggattttggg
ataagcaaggatgcccttacagccttgtcggaaagcaccaaggtgttcatcagcctgatt
gcgtcgactgcgaacgacatttgtcaggagaagcgccgctccacagtcaacgcagatgat
gtttttaacgctcttcaagacctggacttttcagaacttgtggcgccgttaaaagagcag
ctggaagcgttcaaggaggctgtcaaggaacgaaacaaaaacaggccctccaagaagcgc
aaaaacaccgtagacgcgcaggtggctgttccccgaaaccttaagcagcaacagtacatg
gctcagcaccaaaaccagcacgcagctgtggcggcagcccccgccgatgctgacgctgac
gcagtcggcggtgttggtgaagtcctagacggggggcatggcagtgtcgtggatgccggt
ggggaaccagatgagcttcaacacgatgcagccgctttggacgccgacgtgacggcggac
gttttggggggacccgcagacgatgacggacttggcgggcttggtatgggcatgggcctc
ggcctggttgatagtgatccgacttgcctgggtgacccctcggacgtgggcgtggaggtg
gaggacatgctagtggatgcgccgccttaa

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