KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105302
Entry
VOLCADRAFT_105302 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcn03016]
    VOLCADRAFT_105302
Enzymes [BR:vcn01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     VOLCADRAFT_105302
Transfer RNA biogenesis [BR:vcn03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    VOLCADRAFT_105302
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 Torus zf-CCCH_PARP12 zf-CCCH_2 zf-CCCH_9
Other DBs
NCBI-GeneID: 9615981
NCBI-ProteinID: XP_002951897
JGI: 105302
UniProt: D8TZX2
LinkDB
Position
Unknown
AA seq 894 aa
MEVKSEEAIGSAPLLTAQQMIERCIVPVKAEFLIRKVPSQKKEQPPTTPADGANVEPLTN
NGAGTGTAGGAGKQKQDRAQEQSRNQSRKQMRKGVRDGGRQAELCTNYALGRCTWGDRCK
FSHDLVEYIKSKPADLPGMCPWTAVQATCPYGITCRYAMGHASEDELHKTLRVTLMESAS
TASTAPPSGSDPKDHDDNGNNGNGNGSAAAPGVEDATAALPLSLLPLPLPSSIEKEINYL
SKDVQALLWKNRYDFNRADGILKSMSLRISFKHQPKPTREEVRNEGGGGKKAAEGAVAGG
GGGGDVPVESARRQLGNNDPELPPPPQQQQQEEGTREPAAVQAGAAPPQVAAAEVAEVAA
PAKVNEGEDVMKIDVDAAVAPPDGGAAAVTAATCDTDGGADVDADGPAAKRQRTDGAAIN
DAATGPPAAAEQHPPAAAMTAAAVVSESRAAYVELPVRQCERRRLDFRGKTYLAPLTTVG
NLPFRRVCKSLGVDVTCGEMALATNLLQGQAAEWALLKRHPCEDLFGVQVCGGYPDALAR
VGQLLNERLVVDFVDINMGCPIDLVGVWAGVGVCDKNAGSALLRQPRRIEQILRATSAAL
GDIPLTFKTRKGFNDGEDVAHTFLPKAAGWGAAAVTLHGRTRQQRYSKLADWDYIQRCAA
PCSEAGLQLIGNGDVFSYLDWNRQMDRRETEGEGGGSLASIMIGRGALIKPWIFTEIKEQ
RHWDISASERLDLYKQFCTAGLEHWGSDGRGVETTRRFLLEWLSFTCRYVPVGLLEVLPQ
HMNHRPPAFRGRSELETLMSSEEPQASGVGGGALAGRRADWIRISEMLLGPPPAPITSFT
AKHKSSSYAGAPGAARLRHSLGQKDPAEKAALNLGRLSLHTLGGWLHLLMMWEL
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggaggtgaaatctgaagaggctatcggctctgcgccgctgctgacagctcagcaaatg
attgagcgctgcattgttccggttaaggctgagttcctcattcggaaggtgccatcacaa
aagaaggaacagcccccaactacgcctgccgacggcgcgaacgttgaaccactgactaat
aacggcgccggcaccggtactgccggtggcgccggcaagcaaaagcaggaccgcgcgcag
gagcagagcagaaaccaatcacgaaagcagatgcgaaagggtgtccgcgatggaggccgc
caggctgagctctgcaccaactacgctctggggcggtgtacgtggggcgaccgctgcaag
tttagccacgatctggttgagtacatcaagtcgaaacctgctgacctgccggggatgtgc
ccctggactgccgtacaggccacgtgtccgtacggcatcacatgtcgttatgcaatgggt
catgcgtcagaggacgagctgcacaaaacgttgagggtgacgttgatggagtcggcgtca
accgcctcaacggcgccaccgtctggcagcgaccctaaggaccacgatgacaacggtaac
aacggtaacgggaatggcagcgcagcagcaccgggagtagaggacgcgacggccgctctt
ccgttatcgttattaccgttaccgttgcccagctcgattgagaaggaaataaattatctg
agcaaggacgtccaggcgttgctctggaaaaaccggtacgacttcaatcgtgctgacggg
atcctcaagtccatgtctctacgcatctccttcaagcaccaacctaagccaactcgagaa
gaagtgaggaacgagggcggcggcggcaagaaggctgccgaaggagctgtcgccggcggc
ggcggtggcggcgatgtgcccgtagagtcggcccggcggcagctcggaaacaatgacccg
gagctgccgccgccgccgcagcagcagcagcaggaggagggtactcgtgaaccggcggcg
gtgcaggctggtgcagcgccgccgcaggtggcggcggcggaggtggcggaggtggcggcg
ccagcgaaggtgaatgagggtgaagatgtcatgaaaatagatgtcgacgccgcggttgcg
ccaccggacggcggcgccgcagccgttacggcggcgacatgcgacacggatggcggcgct
gacgtcgacgccgatgggccggcggcgaagcggcaacgcactgacggcgccgctatcaac
gatgcggcgacgggccccccggcagcggcggaacagcatccgccggcggcagcgatgaca
gcagcggcagtggtttcggagtcacgtgctgcctatgtggagctgcctgtacgtcagtgt
gagcgccgccgcttggacttccgtggtaagacctacctggcccctctcacaacggtgggc
aacctgcctttcaggcgcgtgtgcaagtccctgggtgtggatgtgacctgcggcgagatg
gctctggccaccaacctgctgcagggccaggcggcggagtgggcgctcctgaagcggcac
ccctgcgaggacttgttcggagtgcaggtgtgcggcggctacccggacgcgctggcgcga
gtgggtcagttgttgaacgagcggctggtggtcgactttgtggacatcaacatggggtgt
ccgattgacctggtgggggtgtgggcgggggtgggggtgtgcgacaagaacgccgggtcg
gcactgctccgccagccccgccgcatcgagcagatccttcgcgccacctccgcggccctg
ggggatatcccgctcaccttcaagacacggaagggcttcaatgacggggaagatgtggcc
cacacgtttctccccaaggctgcggggtggggcgcggcggcggtgacgttgcatggtcgt
acacgtcagcagcggtacagcaagctcgctgactgggattacattcaacgctgcgctgcg
ccttgctccgaagcgggtcttcaactgattggcaacggtgacgtgttctcgtacctcgac
tggaacagacaaatggacagacgcgaaacggagggggaggggggaggctccctcgcttcc
attatgattgggaggggtgctctcatcaaaccatggatattcacagagattaaggagcag
cgtcactgggacatttcggcttcggagcggctggatttgtacaagcagttttgtacggcg
ggtttggagcactggggcagtgacggccgtggggttgagaccacgagacggttcctgctg
gagtggctgtcattcacttgcaggtacgtcccggttgggttgttggaggtcctcccccag
cacatgaaccaccgccctccggccttccgagggcgcagcgagctggagacgctgatgtcc
tctgaagagccccaggcgagtggtgttggtgggggggccctggcggggagaagggctgat
tggatccggatcagtgagatgcttctgggtccacctcccgcccccatcacctcattcact
gccaagcacaagagcagttcgtacgcgggcgcgccgggagcggctagactgcgacactcc
cttggccagaaagatcctgcagagaaagccgcccttaatcttggacggctctccctgcac
accctaggtgggtggctccacctgctgatgatgtgggagctgtag

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