KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105311
Entry
VOLCADRAFT_105311 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VOLCADRAFT_105311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_105311
   03110 Chaperones and folding catalysts [BR:vcn03110]
    VOLCADRAFT_105311
   03029 Mitochondrial biogenesis [BR:vcn03029]
    VOLCADRAFT_105311
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcn04147]
    VOLCADRAFT_105311
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VOLCADRAFT_105311
Messenger RNA biogenesis [BR:vcn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VOLCADRAFT_105311
Chaperones and folding catalysts [BR:vcn03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VOLCADRAFT_105311
Mitochondrial biogenesis [BR:vcn03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VOLCADRAFT_105311
Exosome [BR:vcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VOLCADRAFT_105311
  Exosomal proteins of other body fluids (saliva and urine)
   VOLCADRAFT_105311
  Exosomal proteins of breast cancer cells
   VOLCADRAFT_105311
  Exosomal proteins of colorectal cancer cells
   VOLCADRAFT_105311
  Exosomal proteins of bladder cancer cells
   VOLCADRAFT_105311
SSDB
Motif
Pfam: Cpn60_TCP1 Glyco_hydro_70
Other DBs
NCBI-GeneID: 9617208
NCBI-ProteinID: XP_002951916
JGI: 105311
UniProt: D8TZZ8
LinkDB
Position
Unknown
AA seq 536 aa
MAQTQVVKVAGRAFQSRPARSARRLVIRAAEAKEIVFDQESRRKLQIGINKVADAVGVTL
GPRGRNVVLEQKFGVPQVINDGVSIARAIELRDPVENAGAQLIKEVAGRTNDAAGDGTTT
ASVLAREMIHFGLQNVAAISAGNEDFIGEMIADALDKVGSNGVLSIETSNSTETVVEVQE
GMEIDRGYISPQFVTNQERLLVEYDNCRVLVTDQKIESIRDIIPILEQVTRLNQPLLIIA
EDVAGEALATLVVNKLRGVLNVAAIKAPGFGERRKALLQDIAIVTGAEFIAKDLGMKVEQ
AVVEQLGVARKITISNNSTTMIADAASREEIEMRIAQLKKELAETDSVYDTEKLSERIAK
LSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKE
TLTDPEERLGADIVMKSLRAPCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKIENLL
DAGVIDPAKVTRNGLLNSVSIAGIMLTTQAVMVEKSKPSDVPGGMTASGMPSGMTI
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggcgcaaacccaggttgtcaaggttgcgggccgtgccttccagtcgcggcctgctcgc
tcggcgcgccgcctggtcattcgtgctgctgaggctaaggagattgtgttcgaccaggag
tcgcgcaggaagctgcaaatcggtatcaacaaagttgctgatgccgtcggtgtcactctg
ggcccccgcggtcgcaacgtggtgctggagcaaaagtttggcgtgccccaggtcatcaac
gatggtgtttccattgctcgcgctatcgagctgagggacccggttgagaacgctggcgct
cagctgatcaaggaggtggcaggtcgtaccaacgatgctgcgggcgatggcaccaccacc
gcctcagttctggcccgcgagatgatccacttcggtctgcagaacgtagccgccatctct
gcgggtaacgaggacttcattggcgagatgattgcggacgcgctcgacaaggtcggatcc
aacggcgtgctgtccatcgagacatccaactccaccgagactgtggtggaggtccaggag
ggcatggagatcgaccgggggtacatctctccgcagttcgtcaccaaccaggagaggctg
ctcgtggagtacgacaactgccgtgtgctcgtcacggaccagaagatcgagtccatccgc
gacatcatccccatcctggagcaggtcacccgcctgaaccagccgctactcattattgcc
gaggacgttgcgggtgaggcgctcgccactctggtggtcaacaagctccgcggtgtgctc
aacgttgcggccatcaaggcccctggtttcggagagcgccgtaaggccctcctgcaggac
attgccattgtcaccggagccgagttcatcgccaaggacctgggcatgaaggtggagcag
gcggttgtcgagcagttgggggttgcccgtaagattacgatttccaacaactccacgacg
atgattgcggatgccgcgagtcgggaggagattgagatgcggatcgcgcagctgaagaag
gagctggccgagacggacagtgtgtacgacactgagaagctgtcggagcgcattgcgaag
ctgtcgggaggtgtggcggtgatcaaggtgggtgctgccacggaggcggagctggaggac
cgcaagttgcgaattgaggacgccaagaacgcgaccttcgcggcggtggaggagggcatc
gtgccggggggcggggcggcgctgctgcacctttccgagctggtccccgcgttcaaggag
actctgacggacccggaggagcgcctgggtgccgatatcgtgatgaagagcctgcgggcg
ccctgccgcctcattgccgacaacgcgggagtggagggggaggtcattgtgcagaggctg
ctggggaagccgttcgaggttggctacaacgccatgatcgacaagatcgagaacctcctg
gacgccggagtgatcgacccggccaaggtgacccgcaacgggctgctcaactccgtgtcc
attgcgggcatcatgctcaccacgcaggcggttatggttgagaagtccaagccgtccgac
gtgccaggcggcatgacggcgtcgggcatgccttctggaatgaccatctag

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