Volvox carteri f. nagariensis: VOLCADRAFT_105311
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Entry
VOLCADRAFT_105311 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VOLCADRAFT_105311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_105311
03110 Chaperones and folding catalysts [BR:
vcn03110
]
VOLCADRAFT_105311
03029 Mitochondrial biogenesis [BR:
vcn03029
]
VOLCADRAFT_105311
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcn04147
]
VOLCADRAFT_105311
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VOLCADRAFT_105311
Messenger RNA biogenesis [BR:
vcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VOLCADRAFT_105311
Chaperones and folding catalysts [BR:
vcn03110
]
Heat shock proteins
HSP60 / Chaperonin
VOLCADRAFT_105311
Mitochondrial biogenesis [BR:
vcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VOLCADRAFT_105311
Exosome [BR:
vcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VOLCADRAFT_105311
Exosomal proteins of other body fluids (saliva and urine)
VOLCADRAFT_105311
Exosomal proteins of breast cancer cells
VOLCADRAFT_105311
Exosomal proteins of colorectal cancer cells
VOLCADRAFT_105311
Exosomal proteins of bladder cancer cells
VOLCADRAFT_105311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
9617208
NCBI-ProteinID:
XP_002951916
JGI:
105311
UniProt:
D8TZZ8
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MAQTQVVKVAGRAFQSRPARSARRLVIRAAEAKEIVFDQESRRKLQIGINKVADAVGVTL
GPRGRNVVLEQKFGVPQVINDGVSIARAIELRDPVENAGAQLIKEVAGRTNDAAGDGTTT
ASVLAREMIHFGLQNVAAISAGNEDFIGEMIADALDKVGSNGVLSIETSNSTETVVEVQE
GMEIDRGYISPQFVTNQERLLVEYDNCRVLVTDQKIESIRDIIPILEQVTRLNQPLLIIA
EDVAGEALATLVVNKLRGVLNVAAIKAPGFGERRKALLQDIAIVTGAEFIAKDLGMKVEQ
AVVEQLGVARKITISNNSTTMIADAASREEIEMRIAQLKKELAETDSVYDTEKLSERIAK
LSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKE
TLTDPEERLGADIVMKSLRAPCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKIENLL
DAGVIDPAKVTRNGLLNSVSIAGIMLTTQAVMVEKSKPSDVPGGMTASGMPSGMTI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaacccaggttgtcaaggttgcgggccgtgccttccagtcgcggcctgctcgc
tcggcgcgccgcctggtcattcgtgctgctgaggctaaggagattgtgttcgaccaggag
tcgcgcaggaagctgcaaatcggtatcaacaaagttgctgatgccgtcggtgtcactctg
ggcccccgcggtcgcaacgtggtgctggagcaaaagtttggcgtgccccaggtcatcaac
gatggtgtttccattgctcgcgctatcgagctgagggacccggttgagaacgctggcgct
cagctgatcaaggaggtggcaggtcgtaccaacgatgctgcgggcgatggcaccaccacc
gcctcagttctggcccgcgagatgatccacttcggtctgcagaacgtagccgccatctct
gcgggtaacgaggacttcattggcgagatgattgcggacgcgctcgacaaggtcggatcc
aacggcgtgctgtccatcgagacatccaactccaccgagactgtggtggaggtccaggag
ggcatggagatcgaccgggggtacatctctccgcagttcgtcaccaaccaggagaggctg
ctcgtggagtacgacaactgccgtgtgctcgtcacggaccagaagatcgagtccatccgc
gacatcatccccatcctggagcaggtcacccgcctgaaccagccgctactcattattgcc
gaggacgttgcgggtgaggcgctcgccactctggtggtcaacaagctccgcggtgtgctc
aacgttgcggccatcaaggcccctggtttcggagagcgccgtaaggccctcctgcaggac
attgccattgtcaccggagccgagttcatcgccaaggacctgggcatgaaggtggagcag
gcggttgtcgagcagttgggggttgcccgtaagattacgatttccaacaactccacgacg
atgattgcggatgccgcgagtcgggaggagattgagatgcggatcgcgcagctgaagaag
gagctggccgagacggacagtgtgtacgacactgagaagctgtcggagcgcattgcgaag
ctgtcgggaggtgtggcggtgatcaaggtgggtgctgccacggaggcggagctggaggac
cgcaagttgcgaattgaggacgccaagaacgcgaccttcgcggcggtggaggagggcatc
gtgccggggggcggggcggcgctgctgcacctttccgagctggtccccgcgttcaaggag
actctgacggacccggaggagcgcctgggtgccgatatcgtgatgaagagcctgcgggcg
ccctgccgcctcattgccgacaacgcgggagtggagggggaggtcattgtgcagaggctg
ctggggaagccgttcgaggttggctacaacgccatgatcgacaagatcgagaacctcctg
gacgccggagtgatcgacccggccaaggtgacccgcaacgggctgctcaactccgtgtcc
attgcgggcatcatgctcaccacgcaggcggttatggttgagaagtccaagccgtccgac
gtgccaggcggcatgacggcgtcgggcatgccttctggaatgaccatctag
DBGET
integrated database retrieval system