Volvox carteri f. nagariensis: VOLCADRAFT_105399
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Entry
VOLCADRAFT_105399 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03030
DNA replication
vcn03420
Nucleotide excision repair
vcn03430
Mismatch repair
vcn03440
Homologous recombination
vcn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VOLCADRAFT_105399
03420 Nucleotide excision repair
VOLCADRAFT_105399
03430 Mismatch repair
VOLCADRAFT_105399
03440 Homologous recombination
VOLCADRAFT_105399
03460 Fanconi anemia pathway
VOLCADRAFT_105399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_105399
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_105399
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_105399
Transcription factors [BR:
vcn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
VOLCADRAFT_105399
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
VOLCADRAFT_105399
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
VOLCADRAFT_105399
MMR (mismatch excision repair)
VOLCADRAFT_105399
DSBR (double strand breaks repair)
HR (homologous recombination)
VOLCADRAFT_105399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
DUF223
tRNA_anti-codon
MtrC-MtrF_N
Motif
Other DBs
NCBI-GeneID:
9628430
NCBI-ProteinID:
XP_002952179
JGI:
105399
UniProt:
D8U0K1
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSVNSVITSQTPVPSSRTPVSFTPTATPPMSMSSLKNALTPPSTSLSDRKNYHKIAQLHP
YDSNWCIKAKVELKAPLRSMSIRGSDVKILTVDLVDDTGQMIQGTFWRAPAERFSESLME
GKVYVFHRFKVKPADKKYSSVKADYQIDFTERTEVTEAADQDTSSMTAAVEITPIEVLPR
RVGGRMPVDVMGVVLALGPLGTVKRKADSSELPRRDITLGDMSCKSVVLTLWGDNASAFA
GQLEGQEGKVVMQVTHVRVTDFNGCSVSSLTKSVVSLNPEGSGAAQLLTWYSTAGMVPDR
FTPVGQDLPGTRAVSNGSGAVPSRERFFTVKDVAGISADSLQDDKATFQAVTAYIAMVNS
ELQMYYLANPENGRKVVDQGGGRWAEADGRVVERPEHRYVLSVKLADHTGEAVVQLFNKE
AEAVMGIKADELAALKEAGEGFEAALRAAQWRPWSVVVMSKAREYNGERRVRHTAHRVDT
LDWVSEGQRLAMLIGKYGN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaacagtgtaataacgagccagacgccggtgccctccagtcgcacgccggtg
tccttcacccccactgccaccccgcccatgtctatgtcttctctcaagaatgccctgaca
ccgcccagcacgagcctcagcgatcgcaagaactaccacaagattgctcagcttcatccg
tacgacagcaactggtgcatcaaagctaaggtcgagcttaaggcccctcttcgcagcatg
tccatacgcggatctgatgtcaagatcctcactgtagatctcgtggacgacacgggccaa
atgattcaaggtaccttttggagggcccccgcggagcgcttttcagaatcgctcatggag
gggaaggtgtacgtgttccatcgcttcaaggtgaagcctgcggacaagaagtacagcagc
gtgaaggcagactaccagattgactttacagaacgtacggaagtgactgaggctgccgac
caggacacctcatccatgacggcggctgtggagatcactcccattgaggtgctgcctcgt
cgggtgggtggccgtatgccggtggacgtgatgggggtggtgctggcgctggggcccctg
gggactgtgaagcggaaggcggatagcagcgagctgccgcggcgggatatcacgctggga
gatatgagctgcaagagtgtggtgttgacgctgtggggggacaacgctagtgccttcgcg
ggccagctggaggggcaggagggcaaggtggttatgcaggtgacccacgttcgcgtaact
gacttcaacggctgctccgtgtcttctctgaccaagagcgtcgtcagccttaatccggag
gggtccggagctgcgcaactgctcacgtggtattccacagcgggcatggttccggatcgc
tttacccccgttggacaagacctgccggggacacgggctgtcagcaatggcagcggggcc
gtaccctcccgggagcgattcttcaccgtgaaggacgtggcgggaatcagtgcggactcg
cttcaggatgacaaggccactttccaggccgtgactgcctacatcgcaatggtgaacagc
gaactgcagatgtactacctggctaatccagagaatggccgcaaggttgttgatcagggc
ggtggtcgctgggcggaggcggatggtcgtgtggttgagcgccccgagcaccgctacgtt
ctgagtgtcaagctggcggaccataccggggaggctgtggtgcagctgttcaataaggag
gctgaggcggtgatgggcattaaggcggacgagctggcagccctcaaggaggcgggagag
ggcttcgaggcggcgctccgggcggcccagtggcgaccctggtcggtagtcgtgatgagc
aaggcacgggagtacaacggcgagcggcgtgtacggcatacagcacatcgtgttgacacg
ttggattgggtgtcagaggggcagcggctggcgatgcttattgggaagtacggcaattag
DBGET
integrated database retrieval system