Volvox carteri f. nagariensis: VOLCADRAFT_105457
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Entry
VOLCADRAFT_105457 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K20222
importin-5
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_105457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_105457
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
VOLCADRAFT_105457
Pre-60S particles
VOLCADRAFT_105457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
MMS19_C
HEAT_2
RIX1
TOR1L1_N
PDS5
Htt_N-HEAT_1
Arm
UTP20_N
HEAT_Maestro
HEAT_GCN1
IBN_N
AAA_assoc_C
Motif
Other DBs
NCBI-GeneID:
9628649
NCBI-ProteinID:
XP_002952319
JGI:
105457
UniProt:
D8U0Y5
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MRTMYVRNPTVLSSAETRCLDAAIAANPANFPELVAQLQDADNERRKAAESIFEALKEQP
DLCITCLVQTLRTCTAVEARLFCGVMIRKVIYHRSDQDIKSPVLWDKCSPHVQAVTKQAL
LEALVQEPDRNVGSKVCAAVSDLANLIYGKGGWTELMPTLLGMLSSNQQAQDIVNMLVTF
LNCGNKDVTVAGASAATSFIEAYEDASARQLLSPLVQPMLAVLGQLLSSGDEDEARNVLE
MFIALAETSARFLRPHLIPLVDAMMRVAGAADNLDAQTRQLAVEFLVSLCEAREQSPGMM
RKVPNLARSLFELVMAFLLDIEDDPAWHSANDDSNEDAGAGELYDPGQEYLDRLALSLGG
KAVSDAAAPLLGAWISDSSWQKRAAVFICLAQIAEGCSKIMSSAAYLEQLSRMCVVGLGD
SEPHVRWAACQALGQMCTDLGPELQAKHHSTILPALMQVMEDFNSPRVQAHACAAIVNFS
EGVETDVLPPYLDTLILKLLNLLQNGARLVQEGALTALASVADSSQELFNKYYDTVMPLL
MHILTSANAKEHRLMRAKALECISLVGMAVGKDKFRADARTVLGYMQGVQAGGVDADDPL
SSYMLQAGARLCKCLGSEFIEYLPLVLPSLLASASADPDVQVVDEEDLNAEDLPDDMEAI
AMGDKCLMYRSSILEEKATAVNMLSCYAEELKEGFWQYVGPVLKLVLNGVEGQSPLIKFY
LNEEIRRSAAALLPSLLRCCIAAAERGVQGASPAATAEFLRAAWTPLLEALRKEPEGDIQ
AVQLDSIAEIVEMVDKSLLTPEPIAAAFKVFDIVLEKADKRRADRADRRTTEDFDAEEAE
AIEAENELEEELFDQVATAVGAFLKKFGDDVLPLVESLLMTRYGAMLTDKSRSAEERRIA
ICLVDDLLENSPSGMAKHFNNVLPILLEATRADHADLRQCAVYGLGVMAAKAPVELFRPH
AAAVAEIMAGIIQHPDAKNEDNDMATDNAVAALGRVLTHHAEALGPDGGAAAATLWLQSL
PLKADAVEATAMHEQLVKMCEAQDPRIVPHAAKVATVFAEVLGGGTTYVAGPVGVRMAQL
LMRLQGAVPAEAISSVLSTFKPKQQASYQAYMEGRVPE
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaatgtacgtgcgaaatccaacggtgctgtcatcggcagagacccgatgcctt
gatgcagctatagctgctaatcctgcaaatttccctgagttagtcgctcagcttcaggat
gctgacaacgagcgtcgtaaggcggccgagtctatttttgaggccttaaaggagcagccg
gacctgtgtataacttgcttggttcagacgctgcggacatgcacggcagttgaggcgcgg
ctgttttgcggcgtgatgatacgcaaggtcatttatcaccgttctgaccaggacatcaag
tcccctgtgctgtgggacaagtgcagccctcatgttcaggcggtgacgaaacaggcgctc
ctggaggcactagtccaggagcccgaccgcaacgtgggcagcaaggtttgcgccgctgtg
tctgaccttgctaacttgatatacggcaaggggggatggaccgagctgatgcccaccctt
ctgggcatgctgagcagcaaccagcaggcacaggatattgttaatatgctggtcacgttt
ttgaactgcggcaacaaggacgtgactgtggcaggcgcaagtgcggctacatctttcatt
gaggcttatgaagacgcgtcggcccggcaactcctgtcgcctttagtgcagcccatgctg
gcggtcttgggccagctgctaagcagtggtgatgaggacgaggctcgaaacgtcctggag
atgttcatcgcgctggctgagacgtcggcacgcttcctacggccgcatctgatccctctg
gtggatgccatgatgcgggtggcgggcgctgccgacaacttggatgcgcagactcggcag
ctggctgtggagtttttggtgtcgttgtgtgaagcgcgtgagcagagcccaggcatgatg
cgtaaggtgcccaacctggctcgcagcctgttcgagctggtcatggcattcctgctggat
atcgaggatgatccagcttggcactcggccaatgacgactcgaacgaggatgcgggtgct
ggtgagctatacgacccgggccaggagtacctggatcgtctggcgctcagtctgggcggc
aaggcggtgtcggatgccgcagcgccgctgctgggtgcctggatttcggattcttcctgg
cagaagcgcgcggcggtcttcatttgcctggcgcagattgcggagggttgttccaagatt
atgtcctcagctgcctacctggagcagctgtctcggatgtgcgttgtgggtctcggggat
tcggagcctcacgtgcggtgggcggcgtgtcaagccctcgggcagatgtgcacagatctt
ggaccggagctgcaggcgaagcaccattctaccatcctgcctgcgctcatgcaagtgatg
gaagatttcaacagcccgcgtgtgcaggcgcacgcctgtgctgctattgtgaatttcagc
gagggtgtcgagacggatgtattgccgccttacctggacacgctcatcctcaagctgctc
aacttgcttcaaaacggcgcacggctggtgcaggagggagcactcacggctctggcatcc
gttgcagacagtagccaggagctgtttaacaagtactacgacacggtgatgcctctgctg
atgcacatcctgacctcggccaatgccaaggagcaccggttgatgcgcgctaaggcactg
gagtgcattagcttggtgggcatggcagtaggcaaggacaagttccgtgcggatgcgcgc
accgtgctgggctacatgcaaggagtgcaggcgggcggcgtggacgcggacgacccgctt
tcatcctacatgctgcaggctggcgcgcggctttgcaagtgcctcgggtccgagttcatc
gagtacctgccgctggtgctgccctcgctgctagcttcggcctctgcggaccccgacgtg
caggtggtggatgaggaagacttgaatgcagaagacctgccggacgacatggaggcgatt
gcgatgggggacaagtgtctcatgtaccgctcgagtatcctggaggagaaggccaccgcg
gtaaacatgttgagctgctacgccgaggagctcaaggagggcttctggcaatacgttgga
ccggtcctcaagctagtgctcaacggcgtcgagggccagtcgcctcttatcaagttctac
cttaacgaggagattcgccgctctgcagcagcgctgctgcccagcctattgcggtgctgc
atcgccgccgccgagcgaggtgttcagggggccagtcctgccgccactgccgaattcctg
cgggcggcttggaccccccttttagaggcgctccgtaaggagcctgagggcgacattcag
gctgtgcagctggactccattgcggaaattgttgagatggtggacaagtccctgctcacc
ccggagcccatcgccgcggccttcaaggtgtttgacatcgtgctggagaaggctgacaag
cggcgggccgatcgcgccgaccgccgcaccacggaggacttcgacgcagaggaggcggaa
gccattgaggcggaaaacgagctagaagaggagctctttgatcaagttgccactgcggtg
ggggccttcctcaagaaattcggggacgatgtgctgccgctggtggagtcgttgctcatg
acgcgatatggggctatgctgacggacaagagccgtagcgctgaggaacggcgcattgca
atctgcctggtggatgacctgttggagaactcaccgtcggggatggccaaacatttcaac
aacgtcctgcccatcctgttagaggctacacgcgcggatcacgccgatcttcggcagtgt
gctgtgtacggtcttggtgtgatggctgcaaaggcgccggtggagctgttccgaccgcat
gccgctgcagtagcggagattatggcgggtattattcaacacccagatgccaagaatgag
gacaacgacatggccactgacaatgcagttgcggcgctcggccgcgtgctgacgcaccat
gcggaggcactcggccccgacggtggggcggcggcggccacgctctggctgcagtcgttg
cccctcaaggcggatgctgtagaggctacggcaatgcacgagcagctggtgaagatgtgc
gaagcccaggacccacgcattgtgccccacgccgccaaggtggcgactgtgtttgcggag
gtactgggcggcggtactacgtatgtggcgggtcccgttggggtgcgcatggcgcagcta
ctaatgcggttgcagggcgcggtgccggctgaggcgatttcatccgtgctgtcgaccttc
aagcccaagcagcaagctagctaccaggcgtacatggagggccgcgttcccgagtaa
DBGET
integrated database retrieval system
