Volvox carteri f. nagariensis: VOLCADRAFT_105496
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Entry
VOLCADRAFT_105496 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcn01002
]
VOLCADRAFT_105496
Peptidases and inhibitors [BR:
vcn01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
VOLCADRAFT_105496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
TIP49
AAA_28
AAA_lid_PRS2_C
IstB_IS21
nSTAND3
AAA_14
Mg_chelatase
AAA_18
AAA_17
AAA_7
Motif
Other DBs
NCBI-GeneID:
9628696
NCBI-ProteinID:
XP_002952368
JGI:
105496
UniProt:
D8U182
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MHCSSAREPAPQNVPSDTSSSPAEASAGAAADGLTLADITTTSPLATTGSGALVSAAGAS
AGSPGSSFSSPLPPQQQVQGHGHGQAASTASPPAPAPGPGLPGDGGDATAAGAATAGISL
PPVLQRLLAWLASVWSAVQQFPVWVQMQHLRRLREACEEDPKLARLCTSRIPHHDAADAD
KHAAYLAELARTNPREVLARVESRQFGINAAVVAEYLRALVATGKVSELVKADGSAAAAV
MPQSSFLFSSPHSEGAPPRTLTELLRDLHVRGLAFAGAWGLGGRRRRQEQLVSAAGDGAP
AGDGAGGAGGLVSSLGLEVPGSSVRRPLHVVVGGLAPLQQMVAAAPSAAKVPLLLRPLTL
LWRLTSFAVLLVVLAFAYIAGSQAIRRVQASGGAFVNPAAVGAGPPVSAAGGGGSGSGAS
ASSSSGAPSVEPKEYKKDELPEKSIRTFKDVKGCDEAKEELREVVEFLKNPGKFTRLGAK
LPKGVLLTGPPGTGKTLLAKAVAGEAGVPFFYRAGSEFEELYVGVGSRRMRALFAAAKKR
SPCIVFIDEIDAIGGNRKAWENHTRKTLNQLLVEMDGFESTDGIIVMAATNLPESLDPAL
KRPGRFDRQVAVPLPDIKGRRDILEYYLSDKPLGPDVDRELLARQTQGFSGADLSNLINE
GAILAAKEGADAITQRMLDWAYDKILMGVERKSVKRTLEARRRTAFHEAGHALVALATPG
ASPIHKATIVPRGHALGMVTQVGREDEFSINRQQMLARIRVCMGGTVAEELVFGSEQVSS
GATDDLRQATSMARHMVAECGMSTAIGPVYVAAHEERHGGAGVSEATRQRVDAEVATMLA
DAKEVVRALLLERMQDLTTLAEALLDKETLTREEINSLLQQGDQQTPPPQTPGGGGGGGG
SGGGGGGGRRDREGEEPLEGDPAPAAAQVAGWAAPQSAVRAPDSATDSATPTSGSSRQHQ
QQESIPVGRNGFTSTSARATTTEANWVGATDPGDGRVVVMQGQRSPAAPSTASQLGTGVA
PDRGGAATGPGVGRNGELAWARAQRELSGDTVAGVSGLDAYAGTAATAPVSSNDGDEDGQ
QAGGEGGAAWSRLAHEGFSWFIAG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcactgctcctcggcccgcgagcccgctcctcagaacgtccctagcgacaccagcagc
tcgccagcggaagcgtcggcgggtgctgctgccgatggcctaactctggcggacatcacc
acgacatcacccctagcaaccactggaagcggagcgctggtgtccgccgccggagcgtca
gcggggtcgccggggtcatccttttcctccccgttaccaccacagcagcaggttcagggg
catggacatgggcaggcagcgtccactgcgtcgcctccagcgccagcgcctgggccaggt
ctccccggggacggcggcgatgccacagccgccggcgccgccacggctggcatctccctg
ccgccggtccttcagcgtctgctggcttggctggcctccgtgtggtctgctgtacagcag
ttccctgtctgggtacaaatgcagcacctgcggcggctgcgggaggcttgcgaggaggat
cccaagttagcccggttgtgcacttcccgaatcccacaccacgatgctgctgacgctgac
aagcacgccgcctacctcgcggagctggctcgcaccaatccccgggaggtcctggccagg
gtggagtcccggcagtttgggatcaacgcggcagtggtggccgagtacctgcgggcgctc
gtggccacgggcaaagtttctgagctggtgaaggcggatggttcagccgcagccgcagtc
atgccacagtcttcgttcctgttttcttcgccccattcggagggggccccgccacggacg
ctgacggagctgctgcgtgacctgcatgtgagaggtttggccttcgccggggcttgggga
ctggggggtcggaggaggaggcaggagcaactggtgtcagcggcaggtgacggcgcccca
gctggtgacggcgcgggtggtgctggtggtctggtttcttctctgggtctggaggtcccg
ggatcatccgtacggcgaccgttgcacgtggtggtggggggcttggcgccactgcagcaa
atggtggctgccgcgccatccgccgcgaaggtgcccctgctgctgcggcccctgacgctg
ctgtggcggctgactagcttcgcggtgctgctggtggtgctggccttcgcgtacatagca
gggagccaggccatccggagggtccaggccagcggtggcgcctttgtcaaccctgctgct
gttggcgccgggccaccggtttcagctgctggcggtggcggcagtggttccggagcctcc
gcctcctcgtcttccggggctcccagcgtggagcccaaggagtacaagaaggacgagctg
ccagagaagtcaatccgtaccttcaaggacgtgaagggttgtgacgaggccaaggaggag
ctgcgcgaggttgttgagttcctgaagaaccccggcaagttcacccggctgggtgccaag
ctgcccaaaggagtgctgctgacggggcctccggggactgggaagacgctgctggccaag
gcggtggcgggtgaggcgggtgttccgttcttctaccgagcgggatctgagttcgaggag
ctgtacgtgggggtggggagccgcaggatgcgcgctctgttcgccgctgccaagaagcgc
tccccctgcatagtgttcatcgacgaaattgacgccatcggcggtaaccgcaaggcctgg
gagaaccacacacgcaagacactcaaccaactgctggtggagatggacgggttcgagtcg
acggacggcatcatcgtgatggccgccaccaacctgcctgagagcctggaccccgcactc
aagcgacccgggaggttcgacagacaggttgccgtacctctccctgacattaaagggcgt
cgtgacatcctggagtactacctctccgataagcccctgggacctgacgtggaccgggag
ctgctggccaggcagacgcagggctttagcggcgctgacctgtccaacctgattaacgag
ggcgcaattctggccgcgaaagagggcgccgacgccattacccagcgcatgctggactgg
gcgtacgacaagatcttaatgggagtggagcgcaagagtgtcaagcgcacgctggaggcg
cggcgccgcaccgccttccacgaggccggccacgccctggtggctctcgctacccccggt
gcctcccccatacacaaggccaccatcgtgccccggggacatgccctgggtatggtgacg
caggtgggccgcgaggacgagttctccatcaaccggcagcagatgttggcccgcatccgg
gtgtgcatggggggcactgtggcggaggagctggtgttcgggagcgaacaggtcagcagc
ggggcaacggacgacctgaggcaggccacctccatggcccgccacatggttgccgagtgc
ggcatgagcaccgccatagggcccgtgtatgtggcggcacacgaggagcggcacggcggt
gcgggggtgtctgaagccacccggcagcgagtggatgcggaggtggcgaccatgttggca
gacgctaaggaggtggtgagggcactgctcttggagagaatgcaggatttaaccaccttg
gccgaggcgctcctagacaaggagaccctcacccgcgaggagatcaactccctgctgcaa
caaggggaccagcagacaccaccaccacaaacgccgggcggtggaggcggcgggggcggc
agtggaggagggggaggtgggggccgtcgggatcgcgagggcgaggagcccctggagggg
gatccggctcctgccgccgcgcaggtggcaggatgggctgcgccgcagtccgctgttagg
gcgccagactccgctaccgatagcgccactcccactagtggtagtagcaggcagcaccag
cagcaagagtcgattccagtgggtaggaacggtttcacttccacgtcagcacgggccaca
accactgaggccaactgggtcggtgcgactgacccaggggacggtagggttgtggtcatg
caaggccagaggtcccctgcggcgccttcgacggcttcgcagctaggtaccggtgttgct
ccagatcgaggaggagctgcaaccggacctggtgtggggcgaaatggcgaattggcctgg
gcgcgcgcgcagcgggagctgagcggcgacacggtggcaggagtttcaggtttggacgca
tatgcaggaacggcagcgacagctcctgtgtcgagtaatgacggtgatgaggatgggcag
caagcaggcggggaaggcggggcggcgtggagtaggttggcgcacgaggggttctcctgg
tttatagctgggtag
DBGET
integrated database retrieval system
