KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105669
Entry
VOLCADRAFT_105669 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VOLCADRAFT_105669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_105669
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VOLCADRAFT_105669
SSDB
Motif
Pfam: Nsp1_C
Other DBs
NCBI-GeneID: 9627438
NCBI-ProteinID: XP_002952778
JGI: 105669
UniProt: D8U297
LinkDB
Position
Unknown
AA seq 650 aa
MTAFKDVIFVLLVAEEHELLPCYAVLYTPCRPAATSAPAFGAPASAPSFAFGSTTSAFGS
ATPATPSVFGAPAAAPTAAFGTPAAASAPAIGAPAATSASAFGAPASATAFGAATSAPAF
GAPSTGLSFSQPPAATGASLFGSTAAPAAATSGPAATGFPFGTAPGASSAAASGGLFGAA
PAGGSGGGVFGSTAAPAPAPAAAPAAGGFSFGGTAPAPAAAAASAPAAGPAPAAGAATGF
SFGGGAATGASTGASLSGGAAAGPPATSAAAFGALGGGLAGTAPPAGAASSAPAFSFGGA
AAPAAGASSAAASGFSLAPAAASSAASGLFGTAPTTTSTAPAATSTAAGQTAAGAPGSAA
PAAAASSAAAFSFGSAAAGTAPAAAGTAAASAPASSAAFAFPSAAGATAPAAGTAAASAA
GTAPAGTAGALVPAGAAAAAAPASAATQPLLPVSLKGKNIEEIINEWNAELEEQVAAFNK
HAASLSAWDRTILHNRSCLLGVEEELGVVAAGQDALDRKLTMLETHHKEVHDALSSIEAE
AERMCLAERVLLDGDAAERDRLYARAEALSTALVRLGEDLGGVVADVNELSGAASGDPSS
ALGAVVRILNNQLLALGQVEGRVSSLEQEVQALAGGEATSSAVSINSFRM
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgaccgcgttcaaagatgtaatttttgtactattggtggccgaggagcacgagttactt
ccctgttatgccgtgctgtacacaccctgccgccccgctgccacaagtgcccccgccttc
ggagcgccagcctctgcaccgtccttcgcattcgggagcaccacgtccgcattcgggtcg
gcaaccccagcgaccccctccgtgtttggcgccccggcggctgcgcccacggcggccttt
ggcacgccggcagctgcctctgcaccggccatcggtgcgccagccgccacttcggcgtca
gcttttggcgctccagcttccgcaaccgcgtttggtgcagccacctcagcccctgccttt
ggggcaccaagcactgggcttagcttcagccagccgcctgccgcaacgggggcgtctttg
ttcggcagcacagcggcaccggcggcggccacatctgggcctgctgccaccggctttcct
ttcggtactgcgcctggtgcctcatctgcagcagccagcggcggcctcttcggtgcggcg
ccagctggcggcagtggtggcggtgtcttcgggagcaccgcagcgccggctccggcccct
gcagcagcgccggcggcaggcggcttttccttcggcggaactgcacccgcgccggcggcg
gctgcggctagtgcaccggctgccggccccgcgcctgccgctggcgcagcaactggtttc
agcttcgggggcggagccgcaactggtgccagcacgggtgcgtcgctgtctgggggagcg
gcagcggggccccccgcgacctccgccgctgcctttggcgctctgggtggtggcttggcg
ggtacagcgccgccggcgggggcggcttcgtcggcacctgcgttcagcttcggaggcgcg
gcggcgccggcagccggtgctagctctgcggctgcatcaggcttctctctcgcaccggcg
gcggcgagttcagctgcgtccggattgttcgggactgctcccacgaccacctccacggcg
ccggcggctaccagcaccgcagcaggacaaacggcagcaggtgcacctgggtcagcagca
ccagcagctgcggcatcctccgcagctgccttctccttcggatcggctgcggcggggacc
gcacctgctgccgccggcaccgcggccgcatctgcgccggccagctcggccgcctttgcc
ttcccgtcggcagcaggcgcgactgcacccgccgccgggactgccgcggcgtcggccgct
ggcactgcgcccgcaggcaccgcaggcgcgcttgtgccagcaggcgccgccgccgctgct
gcaccagcgtccgcagccactcaacccctgttgccggtgtcactgaagggcaagaacatt
gaggagatcatcaacgagtggaatgcggagctggaggagcaggtggcggcgtttaacaag
cacgcggcttccctgtccgcctgggatcgcaccatcctgcacaaccgctcctgtttgctg
ggggtggaagaggagctgggagtggtggctgccgggcaagatgcactcgacaggaagctc
acaatgctggagacccaccataaggaagtccacgacgcgctgagcagcattgaggcggaa
gcggagcgcatgtgtctggcggagcgggtgctgctggacggagacgcggcggagcgggac
cgcctgtacgcacgggctgaggcgctgtctacggcgctggtgcggctgggtgaggacctt
ggcggtgtggtggcggatgttaacgagctcagcggggcggcgtctggcgacccctcgtcg
gccctgggtgcagtggtccgcatcctcaacaaccagctattggcattgggccaggtggag
ggtcgggtcagctctttggagcaggaggtgcaggcgctggcgggcggggaggccaccagc
agtgcggtctccataaatagcttccggatgtga

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