Volvox carteri f. nagariensis: VOLCADRAFT_105669
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Entry
VOLCADRAFT_105669 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_105669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_105669
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VOLCADRAFT_105669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
9627438
NCBI-ProteinID:
XP_002952778
JGI:
105669
UniProt:
D8U297
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MTAFKDVIFVLLVAEEHELLPCYAVLYTPCRPAATSAPAFGAPASAPSFAFGSTTSAFGS
ATPATPSVFGAPAAAPTAAFGTPAAASAPAIGAPAATSASAFGAPASATAFGAATSAPAF
GAPSTGLSFSQPPAATGASLFGSTAAPAAATSGPAATGFPFGTAPGASSAAASGGLFGAA
PAGGSGGGVFGSTAAPAPAPAAAPAAGGFSFGGTAPAPAAAAASAPAAGPAPAAGAATGF
SFGGGAATGASTGASLSGGAAAGPPATSAAAFGALGGGLAGTAPPAGAASSAPAFSFGGA
AAPAAGASSAAASGFSLAPAAASSAASGLFGTAPTTTSTAPAATSTAAGQTAAGAPGSAA
PAAAASSAAAFSFGSAAAGTAPAAAGTAAASAPASSAAFAFPSAAGATAPAAGTAAASAA
GTAPAGTAGALVPAGAAAAAAPASAATQPLLPVSLKGKNIEEIINEWNAELEEQVAAFNK
HAASLSAWDRTILHNRSCLLGVEEELGVVAAGQDALDRKLTMLETHHKEVHDALSSIEAE
AERMCLAERVLLDGDAAERDRLYARAEALSTALVRLGEDLGGVVADVNELSGAASGDPSS
ALGAVVRILNNQLLALGQVEGRVSSLEQEVQALAGGEATSSAVSINSFRM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgttcaaagatgtaatttttgtactattggtggccgaggagcacgagttactt
ccctgttatgccgtgctgtacacaccctgccgccccgctgccacaagtgcccccgccttc
ggagcgccagcctctgcaccgtccttcgcattcgggagcaccacgtccgcattcgggtcg
gcaaccccagcgaccccctccgtgtttggcgccccggcggctgcgcccacggcggccttt
ggcacgccggcagctgcctctgcaccggccatcggtgcgccagccgccacttcggcgtca
gcttttggcgctccagcttccgcaaccgcgtttggtgcagccacctcagcccctgccttt
ggggcaccaagcactgggcttagcttcagccagccgcctgccgcaacgggggcgtctttg
ttcggcagcacagcggcaccggcggcggccacatctgggcctgctgccaccggctttcct
ttcggtactgcgcctggtgcctcatctgcagcagccagcggcggcctcttcggtgcggcg
ccagctggcggcagtggtggcggtgtcttcgggagcaccgcagcgccggctccggcccct
gcagcagcgccggcggcaggcggcttttccttcggcggaactgcacccgcgccggcggcg
gctgcggctagtgcaccggctgccggccccgcgcctgccgctggcgcagcaactggtttc
agcttcgggggcggagccgcaactggtgccagcacgggtgcgtcgctgtctgggggagcg
gcagcggggccccccgcgacctccgccgctgcctttggcgctctgggtggtggcttggcg
ggtacagcgccgccggcgggggcggcttcgtcggcacctgcgttcagcttcggaggcgcg
gcggcgccggcagccggtgctagctctgcggctgcatcaggcttctctctcgcaccggcg
gcggcgagttcagctgcgtccggattgttcgggactgctcccacgaccacctccacggcg
ccggcggctaccagcaccgcagcaggacaaacggcagcaggtgcacctgggtcagcagca
ccagcagctgcggcatcctccgcagctgccttctccttcggatcggctgcggcggggacc
gcacctgctgccgccggcaccgcggccgcatctgcgccggccagctcggccgcctttgcc
ttcccgtcggcagcaggcgcgactgcacccgccgccgggactgccgcggcgtcggccgct
ggcactgcgcccgcaggcaccgcaggcgcgcttgtgccagcaggcgccgccgccgctgct
gcaccagcgtccgcagccactcaacccctgttgccggtgtcactgaagggcaagaacatt
gaggagatcatcaacgagtggaatgcggagctggaggagcaggtggcggcgtttaacaag
cacgcggcttccctgtccgcctgggatcgcaccatcctgcacaaccgctcctgtttgctg
ggggtggaagaggagctgggagtggtggctgccgggcaagatgcactcgacaggaagctc
acaatgctggagacccaccataaggaagtccacgacgcgctgagcagcattgaggcggaa
gcggagcgcatgtgtctggcggagcgggtgctgctggacggagacgcggcggagcgggac
cgcctgtacgcacgggctgaggcgctgtctacggcgctggtgcggctgggtgaggacctt
ggcggtgtggtggcggatgttaacgagctcagcggggcggcgtctggcgacccctcgtcg
gccctgggtgcagtggtccgcatcctcaacaaccagctattggcattgggccaggtggag
ggtcgggtcagctctttggagcaggaggtgcaggcgctggcgggcggggaggccaccagc
agtgcggtctccataaatagcttccggatgtga
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