Volvox carteri f. nagariensis: VOLCADRAFT_105835 Help Entry VOLCADRAFT_105835 CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K08737   DNA mismatch repair protein MSH6 Organism vcn  Volvox carteri f. nagariensis Pathway vcn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vcn00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     VOLCADRAFT_105835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vcn03400]     VOLCADRAFT_105835 DNA repair and recombination proteins [BR:vcn03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      VOLCADRAFT_105835 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II ParA SGNH Motif Other DBs NCBI-GeneID:  9622162 NCBI-ProteinID:  XP_002953223 JGI:  105835 UniProt:  D8U3H0 LinkDB All DBs Position Unknown AA seq 1515 aa AA seqDB search MKQKPINAFFGGSAKKDTEPPKSTQRKISAFFGNGVKAELTPGPVANGPITPGAAVATPP PGPSNGAAAAAAAPAARLSLDPGLMTDDALPGPSSEPAAAEAAKGATPALVRPTAVKAPA GGSTSKPKAPSSSAAAADARGPPTAVAKPVKDQAMLKAKSGGGKAAKAKPNKTGKSSGGG PGARKRLRRVVMEDDEEGGGAVEDGLEDDDVGGDQEQLEDSDYEGASESGSDEAFSAEEE EESEEEEDEAAESDGDDVTAAIGKKRKRPPTKVVICGSCEGIGAGVGGVGGGVGGSNGGG KSAVTSTPCTVAPGSCGGAGVGRSGGGGLKSIGGGGNMATPSSARSGKSALAETPSKSQG GSELTLGVAASMEGEAARFADRMAVRFSFLHPDNIRDANQRRPDHPEYDPRTLYIPPGWF KEFKISEGQQQWWNFKAHNFDSVLLFKMGKFYEMFEMDAYVGVEVLGLTFMRGEQPHAGF PEVKYADMAESLARAGYRVVVVEQVMKGTETPEMLAKRNEQRRMQGKKQANVVDRQKVAV LSRGTLVDAEMVASRPDASYVLAVAEMDVGGDEQEAAADKAAGAVRIGLCAVDAASGQVL VGEFVDDEVRSTLRTQLTALQPQELVLPRKALSATTSHVLRNGVRDPRVNSMRGPAGDWS AEKTYRALRDAEYFTASSAAPAATSSPAAAQGGAYGTSEDMEVDGCGQGAAAPGATRSSR PDVDPSKRWPQLLRRIVSDGVSSRPAAMAALGGMIAFLKDSLLDRAVLPLGRFEELPALV ASRGSAGAGEDSSGADVAGAEGPLYMALNGAALENLEILENSDGGSAGTLLSVLDNCATP FGRRRLRQWLCRPLGRIPDIQARQDAVAQLCGELAEAVGQARKLLASVSDLERAVARLHA STVSGASGRDAANVVLYEDAGKRRVAALTSVLKDLRAAHGALSRLREAMQGGGGGSELLR RIVFDRCRPAEVSSALEALEGATDWKEAAATGRAVPEQVAGVGVGGVDEEYDAAMEAVDT VERKMQDYLKELRQRFGRDVNLVSVNKDSHLVEVPDSVAGKLGGEFHLVGNRKGYKRFTG NRLKALVADLDRVMERKEAVLSSILTRLLVKFVSHKALWVAVVEAVADLDALMSLAAHAM SPPDGGPMCRPKLVPPAARDSAAGKTGDSEPSGATFDAVAMRHPAGISGRNNGAFVPNDV RLGRGGSCGGAPPFILLSGPNMGGKSTLLRQVCLATVLAQIGACVPAESLTLSPADAIFV RMGARDAIMTGQSTFFIELAETAAMLAKATSDSLVALDELGRGTATLDGAAVAGAVLQHL ATVTGCRGLFATHYHHLSDEHANDPQVAVMHMACAVEGAADGEEAATAPSSVGNGTGGAG ASSGAEEVTFLYRLTPGACPKSYGTNVARLAGLPPKVVIRAAEVSAQWNQDQKHREHPLR APSGSEPGQERGDAMEVDGQAAARSAGSTVAAAAAVDLRALVSEVQGWRSRNENLDIAQL RQLQAAAAKLIGASP NT seq 4548 nt NT seq  +upstreamnt  +downstreamnt atgaaacaaaagcctattaacgcattcttcgggggttctgccaagaaagatacggagcct cccaagtcgacgcagcgaaagatttctgctttctttgggaatggtgtcaaggcggagctt acgccaggtcctgtcgcaaacggtcctatcacgcccggtgcagccgtggccactccacct ccggggccaagcaacggagccgctgcggctgctgctgcgccagcagcgcggctttcacta gacccgggtttaatgactgacgatgccttaccggggccttcatcagaacccgctgctgct gaagcggcaaagggtgccacaccagcattggttaggccaaccgcagtcaaggcgcctgca ggcggcagtaccagcaagcccaaggcaccatcctcaagcgctgctgctgccgatgctcgg ggccccccaacggcagtagccaaacctgttaaggaccaggcgatgttgaaggcaaagagc ggtggaggcaaggcggccaaggccaaacccaacaagacgggcaagtccagcgggggagga cctggagccaggaagcggttgcggcgggtggtgatggaagacgacgaagagggcgggggt gccgtagaggacggcctagaggatgacgacgtcggtggggaccaggagcaactggaagat agcgattacgaaggagcaagcgagagtggcagtgatgaggctttttcggcagaggaggag gaggagagtgaggaggaggaagatgaggcggcagagagcgatggagacgatgtcacggct gccatcggcaagaagcggaagcgccctcccacaaaggtggtgatctgcggatcttgtgaa gggattggagctggcgttggtggagtgggtggcggtgtggggggttccaacggcggtggc aagtctgcagtcaccagcacaccttgcacggtggcgcccggctcgtgtggtggagctggg gtgggcaggagcgggggaggcgggctaaagagcattggaggcgggggaaatatggcaacg ccttcctccgcgcgtagcgggaagagcgccctggcggagacacccagcaagtcgcaaggt ggttcggagctgacactgggtgttgcagccagcatggagggtgaggcggctcgctttgct gaccgcatggccgtccgcttctccttcctgcacccggacaacatccgcgacgccaaccag cgccgacccgatcacccggagtatgacccgaggactctgtacataccgccaggctggttc aaggaatttaagatcagtgagggtcaacagcagtggtggaatttcaaggcccataacttt gacagcgtgctgctgttcaagatgggcaagttctatgagatgtttgagatggatgcgtat gtgggtgtggaggtgctgggtcttacctttatgaggggcgagcagccccacgcgggcttt cccgaggtcaagtatgcggacatggcggagagtctggccagggcggggtaccgcgtggtg gtggtagagcaggtaatgaaggggaccgagacacctgagatgctcgccaagcgcaacgaa cagcgcaggatgcaaggcaaaaaacaggcgaatgtggtggaccgtcagaaggtggccgta ctcagtcgggggacactggtggatgcggagatggtggcgtccaggccggatgcctcgtac gtgctggcggttgccgagatggatgtgggtggcgatgagcaggaagcagctgcggataaa gcagctggtgcggtgcgcatcgggctttgtgctgtggatgcagcttcgggacaggttctt gtcggtgagtttgtagatgatgaggttcgctccactctcagaactcagctcacggcgctg cagccccaggagctggtgctgcctcgcaaggcattgagcgccacgacatcgcacgtgttg cggaacggagttcgggacccccgggtcaactccatgcggggcccggctggggactggagc gcggagaagacttaccgagcattgcgcgatgccgagtactttacggccagctcagcggcc cctgcggccacttcatcaccagcagcagcacaagggggcgcttacggcacttcagaggac atggaggtggacggctgtggacagggggccgctgcaccgggggccacccggtccagcagg cccgacgtggatccctcgaagcgctggccccagctgctgcgccgcattgtgtctgacgga gtgtcatctcgcccggcagccatggcggcgctgggaggcatgatcgcgtttctgaaggac tctctattggaccgggcggtgttaccactgggccggtttgaggagctgcctgcactggtg gcctccagggggtcagctggagctggtgaggatagcagtggtgctgatgtggctggtgcc gaaggtccgctgtacatggccctcaacggggctgcactggagaacttagagatcttggaa aacagcgatggaggctcggcaggtactctcttgtccgtactggacaactgcgcgacccct ttcggtcgccgccggctgcgccaatggctgtgtcgcccactcggccgtatccccgacatc caggcgcggcaggacgcggtggctcagctgtgtggggagctggcggaggcggtcggacag gctcgcaagctgctggcaagcgtctcagatctggagcgcgctgtcgcccgactgcatgcc tccaccgtttcgggcgcttcgggtcgtgatgccgccaatgtggtgctgtacgaggacgcg gggaagcgccgcgtggccgccctcaccagcgtcctcaaggacctacgcgccgcacacggg gcactgagcaggctgagggaggcaatgcagggaggcggcgggggtagtgagctgctgcgg cgtatcgtattcgaccgttgccgcccagccgaggtgtcctcagctctggaagctttggag ggggctacggactggaaggaggcggccgccacggggagagcagtgcctgagcaggtggcg ggggtgggggtggggggtgttgatgaggagtacgatgccgcgatggaggcggtcgatacg gtggaacgtaagatgcaagactacctcaaggagctgcgccaacgtttcggtcgcgatgtg aacctggtgtccgtgaacaaggactcccacctcgtcgaggtgcctgatagtgtggcgggc aaactggggggcgagttccatttggtggggaacaggaagggttacaaaaggttcacaggc aaccggctcaaggctctggttgccgaccttgaccgggtgatggagcgcaaggaagcggtg ctgtccagcattctcacgcgtcttctggtcaaatttgtgtcgcacaaggcgctgtgggtg gcggtggtggaggctgtggcggatctggatgcgctcatgtctctggcggcgcacgccatg tcgccacccgatgggggacccatgtgcagacccaagctggtgccaccggcggcacgtgac agcgcagctggcaagactggcgacagcgagcccagtggtgcgacctttgatgcggtggct atgcgccaccctgctggtatcagtggccgcaacaacggggccttcgtgcccaatgacgtg cggctgggaaggggaggtagctgcggtggtgcacctccatttatcttgctgtccggaccc aacatgggcggcaaaagcacattgctacggcaggtgtgcctagcaacagtgctggcacag atcggagcatgcgtgccggccgagtcgcttaccctcagtccggctgacgccatctttgtg cgcatgggtgctcgggacgccatcatgaccggacagtccacattttttattgagctggcg gagactgccgccatgctcgccaaggcaaccagcgattcgctggtcgcgctggatgagctg ggtcgtggaaccgcaacgttggatggcgcggcagtggcgggtgcggtcttgcaacatttg gcgacggtgaccggatgccgtgggctgttcgccacacactaccatcacctgtctgatgag catgccaatgaccctcaggtagctgtaatgcacatggcttgtgccgttgagggtgcagct gatggtgaggaggcggcaacggccccgtcatctgtaggcaacggcactggcggtgccggc gcgtcatcaggtgccgaggaggtcactttcctgtatcgcctcacaccgggtgcctgtccc aagagctacggcaccaacgttgcccggctagctggccttccacccaaagtggtgatacgg gcagccgaggtgtccgcacaatggaaccaggaccagaagcaccgggagcatccgcttcga gcgcccagtggctccgaacccggacaggagagaggagacgccatggaggtggacggccag gccgccgcgaggtctgcgggaagtacagttgcagcagcggcggccgtggacctcagagca ctagtgtcggaggtccaggggtggaggtcccggaacgagaatttggacatcgcgcagcta cggcagttgcaagccgcagcggccaaactgatcggagcaagcccctag

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